Pairwise Alignments

Query, 497 a.a., Methyl-accepting chemotaxis protein from Pseudomonas stutzeri RCH2

Subject, 649 a.a., putative methyl-accepting chemotaxis sensory transducer (RefSeq) from Shewanella amazonensis SB2B

 Score =  205 bits (522), Expect = 3e-57
 Identities = 124/349 (35%), Positives = 187/349 (53%)

Query: 147 VFLHAFYVVLESAILIYLAIRANAEAREGEALLGAAAAITAHPERIDLSYRSKASGPVTQ 206
           V + A   +L +  L    +RA      GE    A+ A       +  ++  + S  +  
Sbjct: 299 VVVVAIAAMLMAIWLAITVVRAIRRPVGGEPREIASIAREIAGGNLGQNFLREGSTGIYA 358

Query: 207 RFNHLLDQLGELVGAVVRDTAGLGGTAANLSEATRQMRDGASRQLDETAYMVDAMQQMTV 266
               + D L  +V  +   +  LG +++ +   T + R  +  Q D+ A+   AMQ+MT 
Sbjct: 359 AMAEMNDNLRRIVSELNDASRTLGDSSSGMLGVTEESRKNSESQADQLAHTASAMQEMTH 418

Query: 267 AIDDVAGHADRAAQAAQGASQKAGEGRNAVSGVRSEIGTLAEHIEGTDRLVQDLAAQSEQ 326
            +DD+A +A RA++ A  A   A EG   V   R  I  L ++I     ++++L  ++E 
Sbjct: 419 TVDDIARNAQRASEMASEADHHAQEGMGVVEDTRRSIMVLVDNITDVSGIIENLEKETEN 478

Query: 327 IDRVLEVIRTIADQTNLLALNAAIEAARAGEQGRGFAVVADEVRNLAQKTAASTTEIQGI 386
           +  +L+VIR IA+QTNLLALNAAIEAARAGEQGRGFAVVADEVRNLA +T  ST EIQ +
Sbjct: 479 VGSILDVIRGIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRNLASRTQNSTEEIQAL 538

Query: 387 ISRLQQGSRKATEAMQNSRDSVGRCVGSSQQTTALLDAIASEIEAISQMNEMIAAATHEQ 446
           I RLQ  SR++ E+M+ +     +    + +  A L AIA  + AI  MN  IA A  EQ
Sbjct: 539 IGRLQAESRRSVESMRVNVTEATQTSEKANKAIAALGAIADSVMAIRDMNHQIAVAAEEQ 598

Query: 447 TAVSADMGRHLQSVQQVAERNAGDASQLDNDGRQLHELAGRLGGLSGRF 495
             V   +   ++ +  +A  NA  + Q+ N    + E++ +L G+ GRF
Sbjct: 599 ATVVGTINVSVEEISGLARMNAAGSEQVQNSANGISEISSKLSGIVGRF 647