Pairwise Alignments

Query, 497 a.a., Methyl-accepting chemotaxis protein from Pseudomonas stutzeri RCH2

Subject, 662 a.a., methyl-accepting chemotaxis sensory transducer (RefSeq) from Shewanella loihica PV-4

 Score =  179 bits (454), Expect = 3e-49
 Identities = 110/302 (36%), Positives = 170/302 (56%), Gaps = 15/302 (4%)

Query: 191 RIDLSYRSKASGPVTQRFNHLLDQLGELVGAVVRDTAGLGGTAANLSEATRQMRDGASRQ 250
           R+DL  + +  G +   FNH++    +++G V  +T GL   +  +    R MR+  +  
Sbjct: 358 RVDLKGKDEI-GQLGSAFNHMMADFEKVIGMVRTNTQGLLTASQEMEGCARIMREDVALG 416

Query: 251 LDETAYMVDAMQQMTVAIDDVAGHADRAAQAAQGASQKAGEGRNAVSGVRSEIGTLAEHI 310
             E   +  AM +M+  + ++A +A +A++A+  A+++A EG   V      I  LA+ I
Sbjct: 417 HSEVDQVASAMTEMSATVQEIAQNAVQASEASAQANKEAKEGSLEVERTADSINELAQEI 476

Query: 311 EGTDRLVQDLAAQSEQIDRVLEVIRTIADQTNLLALNAAIEAARAGEQGRGFAVVADEVR 370
               + + +L    + I  VL VI  IA+QTNLLALNAAIEAARAGE GRGFAVVADEVR
Sbjct: 477 ADAAQAINNLDEDIKGIVDVLGVISGIAEQTNLLALNAAIEAARAGEMGRGFAVVADEVR 536

Query: 371 NLAQKTAASTTEIQGIISRLQQGSRKATEAMQNSRDSVGRCVGSSQQTTALLDAIASEIE 430
           +LAQ+   ST +I+ +  RL++G++ A +AM++ R+     V  S++    L  I SE+ 
Sbjct: 537 SLAQRAQTSTEDIRSMTERLERGAKIAVKAMESGRNKAEISVVESKRAGEELIRIVSEVS 596

Query: 431 AISQMNEMIAAATHEQTAVSADMGRHLQSVQQVAERNAGDASQLDNDGRQLHELAGRLGG 490
            I  MNE IAAATHEQ+AVS ++ ++   +  +               R  HE++ RL  
Sbjct: 597 VIDSMNEQIAAATHEQSAVSEEVNQNAMKISDIY--------------RNTHEVSDRLSQ 642

Query: 491 LS 492
           L+
Sbjct: 643 LN 644