Pairwise Alignments

Query, 497 a.a., Methyl-accepting chemotaxis protein from Pseudomonas stutzeri RCH2

Subject, 554 a.a., methyl-accepting chemotaxis sensory transducer (RefSeq) from Shewanella loihica PV-4

 Score =  183 bits (465), Expect = 1e-50
 Identities = 114/287 (39%), Positives = 166/287 (57%), Gaps = 7/287 (2%)

Query: 208 FNHLLDQLGELVGAVVRDTAGLGGTAANLSEATRQMRDGASRQLDETAYMVDAMQQMTVA 267
           FN  +D+L  ++  V R T  +   A N+S  T  M        +ET  +V A+ +M+  
Sbjct: 265 FNQFVDKLQGIIKDVARATVEVKSGADNISSQTAAMAQQLISHNNETDQVVTAITEMSAT 324

Query: 268 IDDVAGHADRAAQAAQGASQKAGEGRNAVSGVRSEIGTLAEHIEGTDRLVQDLAAQSEQI 327
             +VA    + A+A Q A+Q  G  +  V     E+ TL   I+     +  L  QS++I
Sbjct: 325 ASEVAMSTTQVAEATQAATQDVGNAQECVDSSLHEVSTLMAEIDMAAGHINSLNEQSQKI 384

Query: 328 DRVLEVIRTIADQTNLLALNAAIEAARAGEQGRGFAVVADEVRNLAQKTAASTTEIQGII 387
           + VL VI  IA+QTNLLALNAAIEAARAGEQGRGFAVVADEVR+LA +T AST EI  ++
Sbjct: 385 NSVLSVIGGIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRSLASRTQASTLEINEML 444

Query: 388 SRLQQGSRKATEAMQNSRDSVGRCVGSSQQTTALLDAIASEIEAISQMNEMIAAATHEQT 447
           S L      A  +M++S+ S  R V SS+  +  L A+ S + +I+ M+  IA A  EQ+
Sbjct: 445 SELHNLVSLAVSSMESSQQSCHRSVTSSRAISDSLGAVTSAVTSINDMSTQIATAATEQS 504

Query: 448 AVSADMGRHLQSVQQV------AERNAGDASQ-LDNDGRQLHELAGR 487
           +V+ ++ R++ ++Q++      A  +A D SQ L N+GR L  L G+
Sbjct: 505 SVTEEINRNVFAIQEIVNELLQASNSASDTSQGLANEGRNLDTLVGQ 551