Pairwise Alignments

Query, 497 a.a., Methyl-accepting chemotaxis protein from Pseudomonas stutzeri RCH2

Subject, 638 a.a., methyl-accepting chemotaxis sensory transducer (RefSeq) from Shewanella loihica PV-4

 Score =  194 bits (492), Expect = 1e-53
 Identities = 107/290 (36%), Positives = 171/290 (58%)

Query: 208 FNHLLDQLGELVGAVVRDTAGLGGTAANLSEATRQMRDGASRQLDETAYMVDAMQQMTVA 267
           FN  ++++   +  V   +  L   A +++   +Q +D +  Q D+T  +V A+ +M   
Sbjct: 349 FNSFIEKIQHSIIEVTDTSVQLSHAAKDVANQAQQTQDDSQLQKDQTMMVVTAINEMGAT 408

Query: 268 IDDVAGHADRAAQAAQGASQKAGEGRNAVSGVRSEIGTLAEHIEGTDRLVQDLAAQSEQI 327
           + ++AG+A +AA  A+ A   +  G+  V+  R  I  L++ +E    +++ LA  +  I
Sbjct: 409 VHEIAGNAAQAADNAKDADNASSNGQIVVTRARDTINQLSQDVEQVGNVIESLATHTTSI 468

Query: 328 DRVLEVIRTIADQTNLLALNAAIEAARAGEQGRGFAVVADEVRNLAQKTAASTTEIQGII 387
             +L+VIR ++DQTNLLALNAAIEAARAGE GRGFAVVA+EVRNLA +TAAST E+Q +I
Sbjct: 469 GSILDVIRAVSDQTNLLALNAAIEAARAGEAGRGFAVVAEEVRNLASRTAASTDEVQKMI 528

Query: 388 SRLQQGSRKATEAMQNSRDSVGRCVGSSQQTTALLDAIASEIEAISQMNEMIAAATHEQT 447
             LQ  + +A EAM  S+      V +  + +  L  I+ +I AI+ MN  +AAAT EQ+
Sbjct: 529 DNLQSEAARAVEAMTQSKSRSQEGVQAVDEASHTLTEISQQIGAITDMNIQVAAATEEQS 588

Query: 448 AVSADMGRHLQSVQQVAERNAGDASQLDNDGRQLHELAGRLGGLSGRFTV 497
            V  D+ R++  + ++ +R +  +  +    + L++LA RL  L   F V
Sbjct: 589 TVVEDINRNVTEISEITQRTSETSQAVAQASQSLNQLAHRLDTLVAGFKV 638