Pairwise Alignments

Query, 497 a.a., Methyl-accepting chemotaxis protein from Pseudomonas stutzeri RCH2

Subject, 546 a.a., methyl-accepting chemotaxis protein (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  185 bits (470), Expect = 3e-51
 Identities = 117/296 (39%), Positives = 162/296 (54%)

Query: 202 GPVTQRFNHLLDQLGELVGAVVRDTAGLGGTAANLSEATRQMRDGASRQLDETAYMVDAM 261
           G + + FN + D L  LV  V      L   A  +S       +    Q +E   +  AM
Sbjct: 251 GQLAESFNEMQDNLHMLVSEVSNSIVQLSSAAEEISSVALHSSNNMETQQNELNQLATAM 310

Query: 262 QQMTVAIDDVAGHADRAAQAAQGASQKAGEGRNAVSGVRSEIGTLAEHIEGTDRLVQDLA 321
            +M   + DVA + + AA AA  AS  A +G   V+     I  +A  IE T  +++ L 
Sbjct: 311 HEMQATVQDVARNTNDAANAATQASDTATQGSETVNDSIVRIDKVAGAIEATAVVIRKLG 370

Query: 322 AQSEQIDRVLEVIRTIADQTNLLALNAAIEAARAGEQGRGFAVVADEVRNLAQKTAASTT 381
             S  I  VLEVI+ IA+QTNLLALNAAIEAARAGEQGRGFAVVADEVR LA++T  ST+
Sbjct: 371 DDSRNIGMVLEVIQGIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRTLAKRTQDSTS 430

Query: 382 EIQGIISRLQQGSRKATEAMQNSRDSVGRCVGSSQQTTALLDAIASEIEAISQMNEMIAA 441
            I  IIS LQ  + +A E MQ S++ +   V  +++    +  I+S +  ISQMN  IA 
Sbjct: 431 HINSIISELQLRANEAEETMQQSQEMMIETVCKAREAGESIAKISSSVSCISQMNIQIAT 490

Query: 442 ATHEQTAVSADMGRHLQSVQQVAERNAGDASQLDNDGRQLHELAGRLGGLSGRFTV 497
           AT EQ AVS ++ R++ ++   +E  A  A Q+      L  LA +L  +  +F +
Sbjct: 491 ATEEQGAVSEELNRNVANISGASEDVATGAKQMAMACNDLSHLATQLQDMVKKFHI 546