Pairwise Alignments

Query, 497 a.a., Methyl-accepting chemotaxis protein from Pseudomonas stutzeri RCH2

Subject, 634 a.a., methyl-accepting chemotaxis protein (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  197 bits (501), Expect = 9e-55
 Identities = 119/290 (41%), Positives = 163/290 (56%)

Query: 208 FNHLLDQLGELVGAVVRDTAGLGGTAANLSEATRQMRDGASRQLDETAYMVDAMQQMTVA 267
           FN   +++   V  V   T+ L  +A  +S  T + +  A RQ  ET  +  AM +M   
Sbjct: 345 FNRFAEKIHATVAQVSDSTSLLATSAEEMSAITNETQQMAKRQHLETEQVATAMNEMAAT 404

Query: 268 IDDVAGHADRAAQAAQGASQKAGEGRNAVSGVRSEIGTLAEHIEGTDRLVQDLAAQSEQI 327
           + +VA +A  AA AA  AS+    G+  V  V S I  LA+ I    + + +L   + QI
Sbjct: 405 VQEVAHNATDAADAATHASESTEHGKLLVEKVISTISLLADEIAHAAKAINELERNTAQI 464

Query: 328 DRVLEVIRTIADQTNLLALNAAIEAARAGEQGRGFAVVADEVRNLAQKTAASTTEIQGII 387
           D VL VIR IADQTNLLALNAAIEAARAGEQGRGFAVVADEVR LA +T AST+EIQ +I
Sbjct: 465 DSVLVVIRNIADQTNLLALNAAIEAARAGEQGRGFAVVADEVRTLASRTQASTSEIQQMI 524

Query: 388 SRLQQGSRKATEAMQNSRDSVGRCVGSSQQTTALLDAIASEIEAISQMNEMIAAATHEQT 447
             LQ  ++     M  S  +   CV    +    L+AI   +  ISQMN  IA+A +EQ 
Sbjct: 525 EALQHSAKSTVSTMNTSTATTQNCVSLVHEAGEALEAITQAVSTISQMNIQIASAANEQC 584

Query: 448 AVSADMGRHLQSVQQVAERNAGDASQLDNDGRQLHELAGRLGGLSGRFTV 497
           AVSA++ +++ ++  +       A Q    G +L +L+ RL  L  +F +
Sbjct: 585 AVSAEINKNVNNINDITINATESAVQTARAGDELAQLSMRLTTLLAQFRI 634