Pairwise Alignments

Query, 296 a.a., ABC-type nitrate/sulfonate/bicarbonate transport system, permease component from Pseudomonas stutzeri RCH2

Subject, 271 a.a., Urea carboxylase-related ABC transporter, permease protein from Pseudomonas fluorescens FW300-N2E2

 Score =  428 bits (1101), Expect = e-125
 Identities = 222/271 (81%), Positives = 239/271 (88%)

Query: 26  MRLINRSPSRSGWLALAILPFALLLALYLTSSTQRLELNPNDKLLPSFGQMSAAVERLAF 85
           MRLINR P R   L L ILPFAL+L  Y   S +RL  NPNDKLLPS  QM+ AV+RLAF
Sbjct: 1   MRLINRYPDRPSRLLLVILPFALVLFAYFMGSAERLTDNPNDKLLPSAVQMTDAVKRLAF 60

Query: 86  TPDKRSGDYLFWQDTASSLKRLGIGLAIAAVAGLCLGIAAGTLPLFSAPLSPLLTVLSMV 145
           T D RSGDYL WQDTASSL+RL IGL I+A+AGLCLGIAAGTLPL  APLSPLLTV+SMV
Sbjct: 61  TADARSGDYLLWQDTASSLRRLAIGLGISALAGLCLGIAAGTLPLLGAPLSPLLTVVSMV 120

Query: 146 PPLAILPILFIVFGLGELSKVMLIVIGITPILARDLEQRAREIPRELLIKAQTLGANTWT 205
           PPLAILPILFIVFGLGELSKVMLIVIGITP LARDLEQRAREIP ELLIKAQTLGA+TWT
Sbjct: 121 PPLAILPILFIVFGLGELSKVMLIVIGITPCLARDLEQRAREIPPELLIKAQTLGASTWT 180

Query: 206 LILRLVLPQLMPRLLISLRLVLGSAWLFLIAAEAIASTDGLGYRIFLVRRYMAMDVILPY 265
           L+LR+VLPQL+PRLLISLRL+LGSAWLFLIAAEAIASTDGLGYRIFLVRRY+AMDVILPY
Sbjct: 181 LMLRVVLPQLLPRLLISLRLMLGSAWLFLIAAEAIASTDGLGYRIFLVRRYLAMDVILPY 240

Query: 266 VAWITLLAWAMDFTLRRLTQLLFPWYEGAKA 296
           V WITLLAW MD+ L+RLT+  FPWYEGAKA
Sbjct: 241 VVWITLLAWLMDWCLKRLTRQAFPWYEGAKA 271