Pairwise Alignments

Query, 296 a.a., ABC-type nitrate/sulfonate/bicarbonate transport system, permease component from Pseudomonas stutzeri RCH2

Subject, 277 a.a., ABC transporter permease from Rhodopseudomonas palustris CGA009

 Score =  108 bits (269), Expect = 2e-28
 Identities = 68/222 (30%), Positives = 110/222 (49%), Gaps = 7/222 (3%)

Query: 69  LLPSFGQMSAAVERLAFTPDKRSGDYLFWQDTASSLKRLGIGLAIAAVAGLCLGIAAGTL 128
           LLPS   ++ A+  LA        D   W    +SL+R+ +G  +A V GL LG+  G  
Sbjct: 57  LLPSPVAIAEALWELAL-------DGSLWVHLGASLQRVAVGFLLACVVGLTLGLICGWW 109

Query: 129 PLFSAPLSPLLTVLSMVPPLAILPILFIVFGLGELSKVMLIVIGITPILARDLEQRAREI 188
              S  + P++  L  +PPLA +PI  + FGLG+ +   L+ +G    +        R +
Sbjct: 110 RTVSDYVRPVIEALRPIPPLAWIPITILWFGLGDAASYFLVFLGAVFPVFIATYTAIRGL 169

Query: 189 PRELLIKAQTLGANTWTLILRLVLPQLMPRLLISLRLVLGSAWLFLIAAEAIASTDGLGY 248
            R  +  A  LGA  W L   +++P  +P +L  LR+ LG  W+ ++ AE IA+  GLGY
Sbjct: 170 DRNQMNAALCLGAKPWQLFTDVLIPASLPIILPGLRIALGVGWMCVVTAELIAAQTGLGY 229

Query: 249 RIFLVRRYMAMDVILPYVAWITLLAWAMDFTLRRLTQLLFPW 290
            I   R    ++ ++  +  I L+ +AM   L R+ + +  W
Sbjct: 230 LIQQSRMLFQINNVVAGMVTIGLIGFAMSAILERIERRVNAW 271