Pairwise Alignments

Query, 330 a.a., Outer membrane protein and related peptidoglycan-associated (lipo)proteins from Pseudomonas stutzeri RCH2

Subject, 368 a.a., OmpA/MotB (RefSeq) from Shewanella amazonensis SB2B

 Score = 99.4 bits (246), Expect = 1e-25
 Identities = 70/220 (31%), Positives = 99/220 (45%), Gaps = 31/220 (14%)

Query: 135 DSSTFANVGTGLKYYFTENFFAKASVDGMYNIDADEAEWMA--------GVGVGLNFGGG 186
           DS     VG G+ Y FT+N    A      N+D  E +W          G+ +   FG  
Sbjct: 141 DSGIAPFVGAGIGYNFTDNLKLSAKYRRYENLD--EEKWNTLEMESNYWGLELSYRFGSK 198

Query: 187 ARQVAA----VEPTPEPAPAPIVDTEPEPA-PELVRVEL----------------DVKFD 225
           A  V A    V P          D +  PA P   +V+                  ++F 
Sbjct: 199 AAPVVAAPVVVAPVDSDNDGVNDDLDKCPATPADHKVDAYGCTVYKDDVTTHNLGSLRFA 258

Query: 226 FDKSRVREESYSDIKNLADFMQQYPQTSTTVEGHTDSVGTDQYNQRLSERRAEAVRNVLV 285
            + S +   SY  ++ LA++M Q+P ++  + GH  +VG   YN  LSE+RA A   +LV
Sbjct: 259 NNSSVINPSSYESVEKLANYMNQHPGSTVEIGGHASNVGNPDYNMTLSEKRANAAAKLLV 318

Query: 286 NEYGVEGGRVNSVGYGESRPVADNSTEEGRQINRRVEAEV 325
            +YG+   RV + GYG +RPV D +T E    NRRVEA V
Sbjct: 319 EKYGISANRVTAKGYGITRPVMDGNTAEAHAANRRVEAVV 358



 Score = 32.7 bits (73), Expect = 1e-05
 Identities = 33/133 (24%), Positives = 55/133 (41%), Gaps = 16/133 (12%)

Query: 6   TLGVV-IGSMVAATSLSALAQGQGAVEV--EAFGKHYFTDSSRDVQRDGELYGAGVSYFL 62
           TLG+V      +  SLSA A     +    + +G +Y++DS           GAG+ Y  
Sbjct: 102 TLGLVAFWPFASKWSLSAEAGAMNYLVYNNKRWGSNYYSDSGI-----APFVGAGIGYNF 156

Query: 63  TDDVSLGLSYGEYHDLTSKDPVGVDGGHKNIKGSLTSLDAAYHFGAPGVGLRPYVSAGVA 122
           TD++ L   Y  Y +L  +           ++ +   L+ +Y FG+      P V+A V 
Sbjct: 157 TDNLKLSAKYRRYENLDEE-----KWNTLEMESNYWGLELSYRFGSKAA---PVVAAPVV 208

Query: 123 HQSIGQADRGGRD 135
              +   + G  D
Sbjct: 209 VAPVDSDNDGVND 221