Pairwise Alignments

Query, 286 a.a., Universal stress protein UspA and related nucleotide-binding proteins from Pseudomonas stutzeri RCH2

Subject, 326 a.a., UspA domain protein (RefSeq) from Dinoroseobacter shibae DFL-12

 Score = 88.2 bits (217), Expect = 2e-22
 Identities = 94/329 (28%), Positives = 144/329 (43%), Gaps = 67/329 (20%)

Query: 5   RCILVVIDPNQPQELALKRARLISSVSQSRLHLLTC-DAKHDHS--AHLAA------LRE 55
           R IL V D ++ Q +AL+ A  ++    + L ++ C +  HD S  + L+       + E
Sbjct: 9   RKILAVADASEVQ-IALQSALTLADTLGASLEVIACVEPPHDLSILSRLSGEDPGRLIEE 67

Query: 56  QLESDGHQVSTQ--QAWHDSIHQTIITVQQA----------EGCGLVVKQHVPDNPLKRA 103
            +E    +V  +     HD+     + V +A            C  VVK+  P + + R 
Sbjct: 68  AVERTREEVRARLDATMHDTPLDLSVAVGKAYLEIIRHVARSECDFVVKKAEPLSGIDRF 127

Query: 104 LLTPEDWKLLRYCPCPVLMVKTANPWTGGSILAAVDVGNSDL-EHRTLHA---------- 152
           L    D  LLR CPCPV +       +   +LAAVD+   D  E  TL A          
Sbjct: 128 LFASTDQHLLRKCPCPVWLQTPTASKSPRRVLAAVDLDVWDAAEPETLAALNRRVVAAAC 187

Query: 153 ---------TIVNHGFEIASLADGKLHVISAHPSAMLSAADPAFQLKETIEARYREACKQ 203
                     IV H +E  ++  G +   S    A +SA      + E ++AR+ +A  +
Sbjct: 188 MVADAPDAEVIVLHAWE--AIGQGMIWAFSGESDARISADR---YVNEILDARH-DAMNK 241

Query: 204 FQEEFDIPDAQLHIEEGPADALIPRVCH------------QLKAVVTVIGTIARTGFSGA 251
           F        AQ+  E G    L+PR+              QL A + V+GT+ARTG SG 
Sbjct: 242 FL-------AQVRTEIGQGPRLLPRLARGAPETVIHDQSRQLAAELVVMGTVARTGLSGV 294

Query: 252 LMGNTAEVVLDTLESDVLVLKPDDIIDHL 280
            +GNTAE ++++LE  VL +KPD  +  L
Sbjct: 295 FIGNTAENIINSLECPVLAVKPDGFVSPL 323