Pairwise Alignments

Query, 459 a.a., nitrite reductase, copper-containing from Pseudomonas stutzeri RCH2

Subject, 376 a.a., NirK nitrite reductase from Sinorhizobium meliloti 1021

 Score =  140 bits (354), Expect = 5e-38
 Identities = 100/303 (33%), Positives = 150/303 (49%), Gaps = 26/303 (8%)

Query: 168 PKSITLDLRTTEEEGRLSD--GSTYKFWTFDGTVPGPMVRIREGDTVTLNLSNEPDSAHI 225
           PK +   L T EE+  + D  G+     TF+G+VPGP++ + + D V L L N   +   
Sbjct: 72  PKVVEFTL-TIEEKKIVIDEQGTELHAMTFNGSVPGPLMVVHQDDYVELTLINPDTNTLQ 130

Query: 226 HSIDLHAVTGPGGGAAVTQVAPGQTRSFTFRALQPGLYVYHCATP-MVAQHISNGMYGLI 284
           H+ID H+ TG  GG A+T V PG T    F+A + G++VYHCA P MV  H+++GM G I
Sbjct: 131 HNIDFHSATGALGGGALTVVNPGDTTVLRFKASKAGVFVYHCAPPGMVPWHVTSGMNGAI 190

Query: 285 LVEPEGGLP-------KVDHEFYVMQGELYTASPRGARG----------LHEFSLDMLLR 327
           +V P  GL          D  +YV + + Y   PR A G           +  +L+++  
Sbjct: 191 MVLPREGLTDGKGNSITYDKVYYVGEQDFYV--PRDANGKFKKYESVGEAYADTLEVMRT 248

Query: 328 ETPQHLMFNGSKDALTSIHKMEVNTGDSVRIFFGVGGPNLISSFHVIGEIFDKVFDQGSL 387
            TP H++FNG+  ALT    ++   G+ V I       N  +  H+IG   D V+  G  
Sbjct: 249 LTPSHIVFNGAVGALTGDSALKAAVGEKVLIVHSQA--NRDTRPHLIGGHGDYVWATGKF 306

Query: 388 TSPPLTDVQTTLVPAGGATMVEFVADYPGKYILVDHALSRA-EKGLMGVLSVKGEADASI 446
            + P  D +T  +P G A    +  + PG Y  V+H L  A E G     +V G+ +  +
Sbjct: 307 RNAPDVDQETWFIPGGTAGAAFYTFEQPGIYAYVNHNLIEAFELGAAAHFAVTGDWNDDL 366

Query: 447 FSS 449
            +S
Sbjct: 367 MTS 369



 Score = 35.8 bits (81), Expect = 2e-06
 Identities = 38/146 (26%), Positives = 64/146 (43%), Gaps = 28/146 (19%)

Query: 13  LVLPNALWAQTKSSSDVSYRPDVTITLRTDIADGKLVYVSESGLT------RGQV-NPDL 65
           LV P  + A T+ +       + T+T+     + K + + E G         G V  P +
Sbjct: 55  LVKPPFVHAHTQKAEGGPKVVEFTLTI-----EEKKIVIDEQGTELHAMTFNGSVPGPLM 109

Query: 66  RVPEGAVVQINLINGDGAV--HDIAVPEFEATSSEISG-------KGAATSIVFRATRNG 116
            V +   V++ LIN D     H+I   +F + +  + G        G  T + F+A++ G
Sbjct: 110 VVHQDDYVELTLINPDTNTLQHNI---DFHSATGALGGGALTVVNPGDTTVLRFKASKAG 166

Query: 117 TFEYYCTLPG----HKAAGMVGKLVV 138
            F Y+C  PG    H  +GM G ++V
Sbjct: 167 VFVYHCAPPGMVPWHVTSGMNGAIMV 192