Pairwise Alignments

Query, 303 a.a., Predicted permease, DMT superfamily from Pseudomonas stutzeri RCH2

Subject, 298 a.a., hypothetical protein (RefSeq) from Shewanella loihica PV-4

 Score = 73.9 bits (180), Expect = 4e-18
 Identities = 69/285 (24%), Positives = 121/285 (42%), Gaps = 19/285 (6%)

Query: 11  LADGMLLMVALIWGSSYAVAKQALLFYPVLGFLAIRFGLTFVLLLP---------QLRGA 61
           +A+ MLL+ A IWG  +   +  +       F  +RF +  + LLP         +L+G 
Sbjct: 1   MANLMLLVAAAIWGLGFVAQRLGMDHLEPFAFNGLRFVIGALSLLPLIWVMQRKGRLKGV 60

Query: 62  G-----RRALRPGLPLGLVMLAIFLCETWGVMLTSASNAAFLISLCVVITPFMEWLLLRQ 116
                 RR L   L  G ++      +  G++ T+A+NA F+  L +V+ P +  LL   
Sbjct: 61  SDKDILRRVLIGSLACGGILFIAASFQQVGLLHTTAANAGFITGLYIVLVPVLGLLLKHS 120

Query: 117 RPHNTLFLACGLSLAGVWLLTGGPQLSLNLGDALMLAAALLRAVLVCLTRRMTAGREIPA 176
              NT ++ C ++  G++ L+ G   S++ GD L L  A+  A+ +      T    +  
Sbjct: 121 TGTNT-WVGCAVAAVGLYFLSVGDDFSISYGDGLQLIGAIFWAMHILAVDHFT--NRVAP 177

Query: 177 LALTAVQSGVVAAGCILLAMLLPGGLPALPVEPGFWFGTLYLVLFATLFAMFAQNRALGR 236
           + L   Q  V A     ++++L      +      W    Y  L +   A   Q  A   
Sbjct: 178 VVLACGQFLVCALASFGVSLVLE--TTTVAGVQAAWAALAYSGLVSVGVAYTLQVLAQKH 235

Query: 237 SSATRVSLLMGSEPLFGAIIAGVWLGERLGPMGWAGGLLIMLATL 281
           +     ++++  E +F AI   ++LGE L      G  L++L  L
Sbjct: 236 AHPAHAAIILSLETVFAAIGGMMFLGESLSGRALFGCGLMLLGML 280