Pairwise Alignments

Query, 565 a.a., PAS domain S-box from Pseudomonas stutzeri RCH2

Subject, 1147 a.a., Sensor histidine kinase from Xanthomonas campestris pv. campestris strain 8004

 Score =  280 bits (715), Expect = 3e-79
 Identities = 164/401 (40%), Positives = 234/401 (58%), Gaps = 10/401 (2%)

Query: 153  DVTERKLAQLRLLQLNEELEQRVAERTCELREARDAAEAANLSKDKYLAAASHDLLQPLN 212
            D+T+ K A+  LL  NE LEQRVA+R+ E       AE A  SK ++LAA SHD+LQPLN
Sbjct: 748  DITDYKRAERALLDANENLEQRVADRSRE-------AELAQQSKTRFLAAISHDVLQPLN 800

Query: 213  AARLLISTLRE-RQLPQSELHLVERAHLALEGAEDLLTDLLDISKLDQAAIKPDIDAYSL 271
            AARL  S LRE  Q  + + HL ER   +L  AE+LL  LLD+S+LD   ++P ++ +  
Sbjct: 801  AARLFASALRESHQNNEEQRHLAERVDASLRAAEELLDGLLDVSRLDAGGLRPTVEDFDA 860

Query: 272  DDILLPLISEFQPVAAAKGLQLSHYLPRCAISCDFRLLTRILRNLLSNACRYTDAGGVLL 331
              ++  L +++ PVA ++GL+L  +     +  D RLL R+++N L+NA RYT  G ++L
Sbjct: 861  SALMHELAAQYAPVAGSRGLRLQVHARALWVRSDRRLLRRVMQNFLANALRYTRQGRIVL 920

Query: 332  GARKRGDMLRIEVWDTGRGIPEEDLHSIFLEFNQLGVSRAAERSGVGLGLAIVDRIANML 391
            G R RG  +  +VWDTG GIPE  +  IF EF +          G+GLGL+I  RI+ +L
Sbjct: 921  GMRGRGAQVEQQVWDTGPGIPEHHMRQIFEEFRRYQQPFDWGEQGLGLGLSICQRISRLL 980

Query: 392  DYRVLVRSRPGRGSVFSIDVPMAATVPPRSAVTPVIAPQL-GDPLPGRRLLVIDNETSIL 450
            D+ +  RS+ G+GS+FSI +P    VP        + PQ  GD L G R+L +DN+  IL
Sbjct: 981  DHDLSARSQVGQGSMFSILLPRVDAVPAAPVPVLAVRPQASGDSLAGLRVLCVDNDREIL 1040

Query: 451  HSMAALLEQWGCTVVTATDEQTAIAALGGVAPDAILADYHLDHGSTGWDVVLALRARFST 510
              M ALL +W   V+TA+    A+  L    PD +L DYHL     G D + AL+A    
Sbjct: 1041 DGMRALLGRWQVEVITASTVDQAL-ELARERPDVMLVDYHLHDRLDGLDTLDALQAAAVD 1099

Query: 511  RLPVVMITADRSDQCRRQLQGVGVPVLNKPVKPGKMRSVLS 551
             +   ++TAD  D+ ++  +  G  +L KPVKP  +R+ LS
Sbjct: 1100 PIAGALLTADGRDELKQLARQRGYRLLTKPVKPASLRAFLS 1140