Pairwise Alignments

Query, 495 a.a., RND family efflux transporter, MFP subunit from Pseudomonas stutzeri RCH2

Subject, 513 a.a., heavy metal efflux protein, putative (NCBI) from Shewanella oneidensis MR-1

 Score =  178 bits (451), Expect = 5e-49
 Identities = 114/359 (31%), Positives = 181/359 (50%), Gaps = 10/359 (2%)

Query: 61  DKPGKSPFMDMDLVPRYAGEDGDAAAINIDAGITQNLGVRLASVTRGQLASQIEAVGVLE 120
           D PG  P   M+L     G +     IN+   + Q L +++A V R  L   +E VG ++
Sbjct: 158 DVPGTCPICGMNLEKVETGGNTQEININVSGSMQQALALKVAKVERDTLWKFVETVGQID 217

Query: 121 YNARDVAVVQVRAGGFVERVYHHAPGDLLDKGTPLADLLIPEWSAAQEEYLALRRIGEPA 180
           Y+   +  +  R  G++E++   + GD + K   + ++  P+   AQ++YL      +  
Sbjct: 218 YDESQITHIHARVTGWIEKLMLKSVGDTVKKDQLIYEIYSPDLINAQDDYLLAMDTAKAN 277

Query: 181 -------LLEAARQRLRLAGMPAATISQLERTGKVSASITISTPIAGVLQELDVREGMSL 233
                  L+  A  RL   G     I QL  + +    +       G+++ LD+R+GM +
Sbjct: 278 GQGRYKDLVRNAGLRLSFLGFNDRQIKQLAESHQTQYRVPFYAKEDGIVKALDIRDGMYI 337

Query: 234 AAGAPLARINGLDSVWLEVAVPEAQSTGIRVGQRATARLPAMPGERIEGTITAVLPEANA 293
                +  +  L  VW+   V E + + I  GQ+A   +PAM    IEGTI  + PE + 
Sbjct: 338 QPSTEVMSVVDLSKVWVIADVFENEQSWIAKGQKAEIAVPAMNISGIEGTIDYIYPELDP 397

Query: 294 ASRTLRVRVQLPNPQGLLRPGLTAQATLKGADDTSVLLIPSEAVIRTGRRSLVMLAEAGG 353
            +R+LRVRV L N +  LRP   A+ +L G  +  VL+IP EA+I+TG+ + V++ +   
Sbjct: 398 VTRSLRVRVVLNNTEVDLRPKTLAKVSLFGGPNKDVLVIPQEALIQTGKENRVIVKQTDD 457

Query: 354 RYRPVEVETGRDSGNQTAIVAGLEEGQQVVASGQFLLDSEASLRGIVASPATGDTGHAH 412
            +    V  G  S  +  I++GL EG++VV SGQFLLDSEASL+G   S     +GH H
Sbjct: 458 SFTAKAVTVGMMSQGKAEIISGLNEGERVVISGQFLLDSEASLKG---SLMRLSSGHQH 513