Pairwise Alignments

Query, 759 a.a., Rad3-related DNA helicases from Pseudomonas stutzeri RCH2

Subject, 633 a.a., ATP-dependent helicase, DinG family (NCBI ptt file) from Shewanella oneidensis MR-1

 Score = 59.7 bits (143), Expect = 5e-13
 Identities = 146/598 (24%), Positives = 237/598 (39%), Gaps = 63/598 (10%)

Query: 184 RAGQRQLAEAVYKAACTGTTLMAQAPTGIGKTLATLFPQLKAFPGQQLDKLFFLAAKTSG 243
           R  Q Q+A+ +  A  +    + +A TG+GKT A L P + +  G+Q+  +    +K   
Sbjct: 21  RQSQVQMAQIISNAIASKGNAVIEAGTGVGKTFAYLIPAMLS--GKQV--IVSTGSKNLQ 76

Query: 244 RKLALDALHTLRRSGAGELRVLELIARDK-ACEHP-DKACHGESCPLARGFYDRLP---- 297
            +L L  L  L        ++  L  R+   C++  D+     S   AR   D L     
Sbjct: 77  EQLFLKDLPALTAMLGIAPKLALLKGRNNYLCQYRLDRQMQEASHIEARLLDDLLKINQW 136

Query: 298 ---------------AARAAALQHCMLDQATLRGVALE-HEVCPYYLSQELARWADVVVG 341
                          A  + AL   +  + T  G   E ++ C    ++  A  A ++V 
Sbjct: 137 AGMSKDGDIGGLTSVAENSPALPLVVSTKETCLGQRCEFYDACFTRKARSRAMDAKIIVV 196

Query: 342 DYNYYFDISALL-YGLTQSNDWRACVLVDEAHNLLERARGMYSAELDQRTFVGLSSKAPA 400
           +++ +F  S L   G  +       V+ DEAH L +     +  +   RT      K   
Sbjct: 197 NHHLFFADSVLKDTGFAELLPDPDVVIFDEAHLLPDICVSYFGQQSSSRTIDDYLQKLLQ 256

Query: 401 PLKRPLSRV-------QRCWNELHREQVATYQVQAELPLKLLGALQQAVSAITDYLGEQP 453
             +  LS         QRC  +L       + + AE   ++L   +    A  D L E  
Sbjct: 257 IYQTELSDTGQIAQFCQRCLAKLSDWHNGLFSI-AESDWRVLLGNKSIALASWDLLAEL- 314

Query: 454 TGLD----ADLQRAYFDAMHFCRVAELFGAHSLFDVSLLPATARSKARRSILCLRNVVPA 509
           T L     A + R+        ++AEL    + F     P  A S    S   +  + P 
Sbjct: 315 TALQKLLLAHVGRSELLDDIAVKLAELNHKLNHFFQCDNPQAAYSVEFGSRFVMLRISPI 374

Query: 510 PFL--APRLAQARSSVLF-SATLSPRR---FHADMLGLPAASAWIDVESPFQ-SRQLRVC 562
                  +L  A +S +F SATL   R     A  LG+  A A I ++SPF   RQ   C
Sbjct: 375 NIARECQQLFVANTSWIFTSATLQVNRSLAHFAKELGISDAKAHI-LDSPFDYPRQALFC 433

Query: 563 LAGHVSTRYQDRQASLGAVVELVARQYLERPGNYLAFFSSFDYLQQVTALLREHYPDVPF 622
           +   +      +QA L  +V++  +      G     F+S   L+Q    LR      P 
Sbjct: 434 VPRQLGNVANQQQA-LKQLVDVCVKAIEAAQGRTFILFTSHKMLEQTALALRTR-TQYPL 491

Query: 623 WEQTRGMQEAARNAFLERFTEHSEGIGFAVLGG--AFAEGIDLPGQRLIGAFVATLGLPQ 680
             Q     +A + + L +F +    +G AVL G  +F EG+D+ G+ L    +  L  P 
Sbjct: 492 LVQG----QAGKQSLLTKFRQ----LGNAVLLGTSSFWEGVDVRGKLLSCVIIDKL--PF 541

Query: 681 VNPVNEQFKTRLDELFGRGHG-YDYTYLYPGLQKVVQAAGRVIRTQQDEGVVHLIDDR 737
           V+P    ++ R D +  +G   +    L   +  + Q  GR+IR ++D GV+ L D+R
Sbjct: 542 VSPDEPLYRARADNISRQGGDPFTQVSLPQAIIALKQGVGRLIRDEKDCGVLILCDNR 599