Pairwise Alignments

Query, 539 a.a., Methyl-accepting chemotaxis protein from Pseudomonas stutzeri RCH2

Subject, 548 a.a., methyl-accepting chemotaxis protein HlyB from Vibrio cholerae E7946 ATCC 55056

 Score =  243 bits (620), Expect = 1e-68
 Identities = 143/351 (40%), Positives = 213/351 (60%), Gaps = 3/351 (0%)

Query: 192 QLLLLVIGVVVMCMTVRHVIIR---RINAMRHTMNAMAEDEDLSRSVAIGAKDEIGAMGD 248
           Q++++  G+++  +T   +I     R+  ++  M++ A +  L   + +   DE+  +G 
Sbjct: 198 QMVIIAAGLIISFITSLVIITNLRSRVAYLKDRMSSAAANLSLRTRLELDGNDELCDIGK 257

Query: 249 AFNRMIGKFRHSLEAVAGVTHQLTDVSERVSHVAEKTLAAVNEQRSETDMVASAMNEMSA 308
           +FN  I K  HS+E VA  + +L  ++  VS  A  T +    QR  T  VA+A++E+ A
Sbjct: 258 SFNAFIDKVHHSIEEVAENSKELATMASSVSQRAHMTQSNCASQRDRTVQVATAIHELGA 317

Query: 309 TVQEVARNANQTATASAGADTESKAGVKVATEALDGIEVLIAEIEKAAQVIQRVESDSAS 368
           TV E+A NA   A  +  A   S  G KV  E  + I+ L+ E++ A QV+  + +    
Sbjct: 318 TVSEIASNAAMAADVAKQATLHSGEGKKVVGEVQNRIQTLVNELDNATQVVSSLATQING 377

Query: 369 IDMVLGVINGIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRTLASRTQKSTEEIQAM 428
           I   L  I  I+EQTNLLALNAAIEAARAGEQGRGFAVVADEVRTLASR+  STEEIQ +
Sbjct: 378 ISSTLDTIRSISEQTNLLALNAAIEAARAGEQGRGFAVVADEVRTLASRSAASTEEIQQV 437

Query: 429 IEQLQSGVRNAVQAMKEAQLRARSGSQCVEKAAQSLGLIATEVGTINEMNTQIATAAEQQ 488
           I +LQ+    AV+AM++ + ++    +   KA QSL  I +++  IN+ N Q+ATA E+Q
Sbjct: 438 INRLQTESTRAVEAMEKGRSQSDVVVEFSAKANQSLTEINSQIDQINDQNIQVATATEEQ 497

Query: 489 SAVAEEINRNISTISRIADTTSTDATQTSEISDELVRLATELNRLVGQFKL 539
           S V E+INRN+  I+++   TS  A + S  S  L RL+++L++LVG F+L
Sbjct: 498 STVVEDINRNVEDINQLTTETSHVADELSRASASLQRLSSQLDKLVGSFEL 548