Pairwise Alignments

Query, 539 a.a., Methyl-accepting chemotaxis protein from Pseudomonas stutzeri RCH2

Subject, 644 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

 Score =  241 bits (614), Expect = 8e-68
 Identities = 150/401 (37%), Positives = 220/401 (54%), Gaps = 9/401 (2%)

Query: 143 LAHADYRGTNCLTCHQVAENA---VMGAVRISYDLKALDQEVDRNIMISGAIQLLLLVIG 199
           L   DY+G   +      E+    ++G V +      LD    R ++ + A+  + + +G
Sbjct: 249 LISTDYQGEEVMVASIYIESMDWFLVGTVPVHEVFAELDAVAQRMMLTTLAVAAIFIFMG 308

Query: 200 VVVMCMTVRHVIIRRINAMRHTMNAMAE-DEDLSRSVAIGAKDEIGAMGDAFNRMIGKFR 258
           + +      + I   IN +      +   D DLS+ + +   DEI  +   FN  I K  
Sbjct: 309 IFLA-----NSIAMPINQIAKRFTDLGRGDGDLSQRIEVKGNDEIAQLSKGFNGFIEKIH 363

Query: 259 HSLEAVAGVTHQLTDVSERVSHVAEKTLAAVNEQRSETDMVASAMNEMSATVQEVARNAN 318
            S++ VA  + +L   +E VS  A  T     +QR +T  V +A+N+M AT+ E+A NA 
Sbjct: 364 QSIKDVAQTSRELQVAAEGVSRKALVTHDNSQQQRDQTIQVVTAINQMGATISEIASNAA 423

Query: 319 QTATASAGADTESKAGVKVATEALDGIEVLIAEIEKAAQVIQRVESDSASIDMVLGVING 378
             A  +  A   +  G  V  +A + I  L  +IE   +V++++ S +  I  +L  I G
Sbjct: 424 TAAETANQASGNADQGRNVVNKAKEAISRLAHDIENTGKVVEQLASTTQEIGSILDAIRG 483

Query: 379 IAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRTLASRTQKSTEEIQAMIEQLQSGVRN 438
           I+EQTNLLALNAAIEAARAG+QGRGFAVVADEVR LASRT  STEEIQ MI QLQ+  +N
Sbjct: 484 ISEQTNLLALNAAIEAARAGDQGRGFAVVADEVRNLASRTASSTEEIQKMINQLQNDAKN 543

Query: 439 AVQAMKEAQLRARSGSQCVEKAAQSLGLIATEVGTINEMNTQIATAAEQQSAVAEEINRN 498
           AV AM   +     G    ++A Q L  I+  +  I++ NTQ+ATA E+QS V   IN+N
Sbjct: 544 AVSAMDAGKTVTHQGVAASDEAVQVLMSISDRIHDISDRNTQVATATEEQSTVVHTINQN 603

Query: 499 ISTISRIADTTSTDATQTSEISDELVRLATELNRLVGQFKL 539
           I  I+ I + T++ A + ++ S  L  L+  L++LVG FKL
Sbjct: 604 IEEINAINEVTTSTAEELADASKSLRELSGRLDKLVGNFKL 644