Pairwise Alignments

Query, 539 a.a., Methyl-accepting chemotaxis protein from Pseudomonas stutzeri RCH2

Subject, 564 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

 Score =  226 bits (577), Expect = 1e-63
 Identities = 138/349 (39%), Positives = 200/349 (57%), Gaps = 4/349 (1%)

Query: 195 LLVIGVVVMCMTVRHVIIRRINAMRHTMNAM----AEDEDLSRSVAIGAKDEIGAMGDAF 250
           L V+G+V   + V  ++ R I  ++H ++++    A   DL+  + + ++DEIG +  AF
Sbjct: 216 LSVVGLVFTIIAVSVLVSRGIAPLQHVVSSLQAVAAGGGDLTARIKVESQDEIGDVAKAF 275

Query: 251 NRMIGKFRHSLEAVAGVTHQLTDVSERVSHVAEKTLAAVNEQRSETDMVASAMNEMSATV 310
           N  + K    +  +    + +   ++ +     +    ++    ETD V +A+ EMSAT 
Sbjct: 276 NAFMDKLHPLMTDIRASANTVEAAAQELDQQTSQASHKMDGHCLETDKVVAAVTEMSATA 335

Query: 311 QEVARNANQTATASAGADTESKAGVKVATEALDGIEVLIAEIEKAAQVIQRVESDSASID 370
           +EVA N   TA A   A+++     K    A+DGI  L+ E+ + +  +  +   +A I 
Sbjct: 336 REVASNTYSTAQAIESANSQIAVAQKEVNLAIDGIGELVNEVNQTSAAVGDLSQQAAKIT 395

Query: 371 MVLGVINGIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRTLASRTQKSTEEIQAMIE 430
            VL VI  IAEQTNLLALNAAIEAARAGEQGRGFAVVADEVR+LASRTQ ST+EI  M+ 
Sbjct: 396 QVLKVIGDIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRSLASRTQNSTKEIGEMLN 455

Query: 431 QLQSGVRNAVQAMKEAQLRARSGSQCVEKAAQSLGLIATEVGTINEMNTQIATAAEQQSA 490
            L  GV  AVQ+M  +Q R    +    +  +SL  I+  V  I++M  Q A+AAEQQSA
Sbjct: 456 ALHQGVSKAVQSMNISQERGEKTALESVQIKESLAGISKAVSLIHDMGIQTASAAEQQSA 515

Query: 491 VAEEINRNISTISRIADTTSTDATQTSEISDELVRLATELNRLVGQFKL 539
           VAE+IN+N+  I +I +  S    QT  +S  L     ++  LVG FKL
Sbjct: 516 VAEDINQNLVAIQQIVNELSESFKQTESVSASLSHSGQQMGTLVGHFKL 564