Pairwise Alignments

Query, 539 a.a., Methyl-accepting chemotaxis protein from Pseudomonas stutzeri RCH2

Subject, 541 a.a., Histidine kinase, HAMP region:Bacterial chemotaxis sensory transducer from Pseudomonas syringae pv. syringae B728a

 Score =  239 bits (609), Expect = 3e-67
 Identities = 140/347 (40%), Positives = 209/347 (60%), Gaps = 3/347 (0%)

Query: 196 LVIGVVVMCMTVRHVIIRRINAMRHTMNAMAE---DEDLSRSVAIGAKDEIGAMGDAFNR 252
           L+I   ++ +    ++I+ I     T    AE     +L+R ++I   DE G +  A   
Sbjct: 195 LLIAATLLTLVFAWMLIKSITTPIATALLAAETIAQGNLTRPISIDGTDEAGRLLLAMKT 254

Query: 253 MIGKFRHSLEAVAGVTHQLTDVSERVSHVAEKTLAAVNEQRSETDMVASAMNEMSATVQE 312
           M  K R +L+ ++G   QL   +E ++ V +++   + +Q  E +  A+A+N+M++ V+E
Sbjct: 255 MQDKLRDTLQGISGSATQLASAAEELNAVTDESARGLVQQNDEIEQAATAVNQMTSAVEE 314

Query: 313 VARNANQTATASAGADTESKAGVKVATEALDGIEVLIAEIEKAAQVIQRVESDSASIDMV 372
           VARNA  T+ AS  A T +  G  +  E +  IE +  +++  A++I  + ++S  I  V
Sbjct: 315 VARNATSTSQASRSAATSAGDGRDLVQETVSAIERMSGDVQGTAELIISLANESRDIGKV 374

Query: 373 LGVINGIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRTLASRTQKSTEEIQAMIEQL 432
           L VI G+A+QTNLLALNAAIEAARAGE GRGFAVVADEVR LA RTQ+ST EI+ MI  +
Sbjct: 375 LDVIRGLADQTNLLALNAAIEAARAGEAGRGFAVVADEVRALAHRTQQSTSEIERMISSI 434

Query: 433 QSGVRNAVQAMKEAQLRARSGSQCVEKAAQSLGLIATEVGTINEMNTQIATAAEQQSAVA 492
           Q+G   AV +M+ +  RA S     + A Q+L  I + V  INE N  IA+AAE+Q+ VA
Sbjct: 435 QTGTEQAVSSMRNSTERAESTLNIAKGAGQALNTINSAVEEINERNMVIASAAEEQAQVA 494

Query: 493 EEINRNISTISRIADTTSTDATQTSEISDELVRLATELNRLVGQFKL 539
            E++RN+  I  ++  ++  A QTS  S EL RLA +LN +V +F L
Sbjct: 495 REVDRNLVNIRDLSAQSTNGANQTSAASTELSRLAIDLNGMVARFAL 541