Pairwise Alignments

Query, 585 a.a., Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases from Pseudomonas stutzeri RCH2

Subject, 636 a.a., acetate--CoA ligase from Methanococcus maripaludis S2

 Score =  337 bits (865), Expect = 7e-97
 Identities = 222/610 (36%), Positives = 332/610 (54%), Gaps = 37/610 (6%)

Query: 7   EKQPKDLTVPPNW--PDARFSEGEFSWPMAAD----ALNGLPGGGLNLAHEAVDRHAAGP 60
           E Q K L  P  +    A+  E + +W  A D          GG LN ++  VDRH  G 
Sbjct: 15  ELQQKALDDPEKFWGEQAKCLEWDKTWDKALDWNPPYAKWFKGGSLNASYNCVDRHIKGN 74

Query: 61  RAGYCALRFLERNGSRRELSYLQLKRQTNRFANVLAQLGVARGERLFVLCNRGVELYLGV 120
           R    A+   + +GS   L+Y +L R+ N+FANVL  LGV +G+ + +      E  + +
Sbjct: 75  RRNKAAIICEKEDGSCGILTYYELYREVNKFANVLENLGVEKGDVVTIYMPMMTEAIIAM 134

Query: 121 LGGLKNGCVVSPLFAAFGPEPLETRLRLGDCSVLLTSEMLYRK----KVARLRDRLPL-- 174
           L   + G + + +F+ F  + L  R+      +L+T+ +LYR+     + ++ D+  L  
Sbjct: 135 LACSRIGAIHNVVFSGFSSDALADRINDSKSKILVTTNLLYRRGKEIDLKKILDKALLNC 194

Query: 175 --LKHVLLYDESG--GHTSIDGTLDLHD-LLAAAGEEFKIAPTTADSPSLLHFTSGTTGT 229
             +KHV +Y + G      + G     D L+  A    +  P  ++ P  + +TSGTTG+
Sbjct: 195 NSIKHV-VYAKRGIEEFNLVSGKEYFWDELMGGAKSYVEPVPVESEHPLFILYTSGTTGS 253

Query: 230 PKGALHVHGAALTHYV-TGRYALDLHPDDIYWCSADPGWVTGTSYGILAPLLLGVTSVVD 288
           PKG +H  G  LT+   T  +   L+  D++WC+AD GW+TG +Y +  PL LG T V+ 
Sbjct: 254 PKGVVHSTGGYLTYATKTMDWTWGLNEMDVFWCTADIGWITGHTYVVYGPLSLGATIVLY 313

Query: 289 CGEFD---AERWYGILEKERISVWYTAPTAIRMLMKAGPELARRHFHPQLRFVASVGEPL 345
            G  D    +R +GI+E   +++ YTAPTAIRMLM  G +    H    LR + SVGEP+
Sbjct: 314 EGAIDYPEPDRLWGIVENHGVTILYTAPTAIRMLMMYGEKWVNTHDLSTLRLLGSVGEPI 373

Query: 346 NPEAVWWGKEVLG---LPIHDNWWQTETGGIMI---ANIPAMPIKPGSMGKPLPGVEAAI 399
           NP A  W  +V+G    PI D +WQTETGG +I     I ++P+KPGS   P  G++  +
Sbjct: 374 NPRAWKWYYKVIGKEKCPICDCYWQTETGGHIIYPPIGIQSVPLKPGSATFPGIGIDVDV 433

Query: 400 VRHGEDGNLTFLGDDEIGELALKQPWPGMFRTYLGQEERYRRCFAGDW---YLSGDLARR 456
           V    +GN   +  +  G L +K+PWPGM       +ERYR  +   +   + + D A +
Sbjct: 434 V--DNEGNP--VDANVKGNLIIKRPWPGMLAGLWNNDERYRAAYWDRFKNKFSTSDYAIK 489

Query: 457 DADGYYWFIGRSDDVIKSAGHLIGPFEVESALMEHSAVAEAAVIGKPDPLLGETVKAFVS 516
           D DGY W +GRSD+V+  +GH IG  E+E  L+ +  VAE+AV+GKPD + GE   AFV 
Sbjct: 490 DQDGYIWVLGRSDEVLNVSGHRIGTAELEHELVSNKMVAESAVVGKPDDVKGEVPVAFVI 549

Query: 517 L-KRGRE-ASEALHDELIGHARKRLGAAVAPKELEFLASLPRTRSGKLMRRLLKARELGL 574
           L ++ RE  S  +  ELI H R  +G    P  + F+  LP+TRSGK+MRR+LK   +G 
Sbjct: 550 LNEKYRELPSNEVKAELIKHIRDTVGPIGTPAMIFFVNKLPKTRSGKIMRRILKKLIMGE 609

Query: 575 PEGDISTLEN 584
             GD++TLE+
Sbjct: 610 EIGDVTTLED 619