Pairwise Alignments

Query, 404 a.a., diguanylate cyclase (GGDEF) domain from Pseudomonas stutzeri RCH2

Subject, 559 a.a., GGDEF domain protein (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score =  116 bits (291), Expect = 1e-30
 Identities = 64/157 (40%), Positives = 96/157 (61%), Gaps = 2/157 (1%)

Query: 234 DALSGLANRRSHDLALRQRVAQARRDRRPLSLLLLDLDDFKAYNDTFGHPAGDALIRTFA 293
           D+L+GL NRR  D  L   +A+A R  R   LL++D+D FK +NDT+GH  GD  ++  A
Sbjct: 389 DSLTGLHNRRFFDEVLAMELARAARGERGFGLLIVDVDRFKEFNDTYGHAEGDLALQHLA 448

Query: 294 DLLVGFARRPLDQAARVGGEEFALLLYNCDNAAAQRIARQLISALAALDIRHPQEAIARV 353
            +LV  +R  +D A R+GGEEFA++ +  D      +AR++ + L +L + H       +
Sbjct: 449 RVLVSSSRELVDMAYRLGGEEFAIIAHVDDALQLDDVARRVCAELRSLSLPHTASRSGIL 508

Query: 354 GVSIGIATLQEGQL--PEQLYHCADTALYQAKTSGKN 388
            VSIG A LQ G++   + LY  ADTALY+AK +G++
Sbjct: 509 SVSIGGAMLQSGEVSTADTLYRRADTALYRAKQAGRD 545