Pairwise Alignments

Query, 302 a.a., Predicted permeases from Pseudomonas stutzeri RCH2

Subject, 330 a.a., AEC family transporter from Vibrio cholerae E7946 ATCC 55056

 Score =  113 bits (282), Expect = 7e-30
 Identities = 87/272 (31%), Positives = 135/272 (49%), Gaps = 5/272 (1%)

Query: 35  AERINYFVLFPALLFSSLATAPLDNPALPQLAAAVMLGLGLPWIALLLMKRLRGWPAGRF 94
           A RI + V  PA+LF S+ ++  D  +   L    ++   L ++  L   R        +
Sbjct: 54  ASRIVFQVTLPAMLFLSIVSSKHDFSSSTSLVVYSLIANMLFFLFTLFSTRKLIDRPHDW 113

Query: 95  GAITQGVLRFNT-YLGLAAVGSLFGKEGLALAALMLALMVPTVNVMSVWALTAE---RGL 150
           G ITQG  R NT  +GLA V + +G  G+ALAA+ +A      N+ +V ALT      G 
Sbjct: 114 GVITQGGFRANTAIIGLAYVANTYGNAGVALAAIYVASTTVLFNIQAVIALTPRGESNGW 173

Query: 151 SVRGLLLP-IAKNPLILACVAGALVNLSGLGLPGGTDRLLSLLAAASLPLGLLCVGAALK 209
               L+   + KNPLI++ V G L  L+ + +P          A  +LPL LLC G +L 
Sbjct: 174 QAGKLMFKTLTKNPLIISIVLGFLCYLASVPIPKIVTDAGHYFANMTLPLALLCTGGSLN 233

Query: 210 PQELGGEIPALGWNCAARLLAVPLLAYGVARVLGLPPMETTILVLFFALPTAPTAYVLTR 269
              L  +  +  +    +L+  PLL  G A +LG   ++  +L L  + PTA  +YV+ R
Sbjct: 234 LNSLKDDRHSAWFATGYKLILSPLLITGGAWLLGFRGLDLGLLFLMTSAPTAAASYVMAR 293

Query: 270 QLGGDSHLMAGIITLQTLLAAASLPLVLTLLN 301
            +GG++ L A II L T+ +  +  L + LL+
Sbjct: 294 AMGGNATLAANIIALTTVFSLFTCTLGIFLLS 325