Pairwise Alignments

Query, 854 a.a., DNA ligase D from Pseudomonas stutzeri RCH2

Subject, 285 a.a., hypothetical protein from Sinorhizobium meliloti 1021

 Score =  100 bits (249), Expect = 1e-25
 Identities = 56/144 (38%), Positives = 80/144 (55%), Gaps = 4/144 (2%)

Query: 680 VLDLDPDPALPWKRMLEATQLTQTLLDEIGLASFLKTSGGKGLHIVVPLD----SVHDWT 735
           + DLDP P +P+  ++ A +  +  LDE+GL SF KT+GGKGLH+V P          W 
Sbjct: 108 LFDLDPGPDVPFATVVAAAREMRDRLDELGLVSFCKTTGGKGLHVVTPFAVNKRKPLSWA 167

Query: 736 EVKSFSQAIARYLAKLLPSHFSAVSGPKNRVGRIFIDYLRNSRGASTVAPYSVRAREGLP 795
           E K F+  +   +A+  P  +        R GRIF+DYLRN R A+ VAP S RAR G  
Sbjct: 168 EAKGFAHDVCEQMARDNPDLYLIKMSKSLRGGRIFLDYLRNDRMATAVAPLSPRARPGAT 227

Query: 796 VSVPIHREELADLKGANLWTVRNL 819
           VS+P++  ++        +TVR +
Sbjct: 228 VSMPLNWTQVKSDLYPKRFTVRTV 251



 Score = 56.2 bits (134), Expect = 2e-12
 Identities = 34/105 (32%), Positives = 58/105 (55%), Gaps = 13/105 (12%)

Query: 498 LKPELMCEVAYAEMTRQGVVRHSVFHGLRSDKPAEAITHERAKPVAS----QTKASAARQ 553
           +KPEL+ E+ +A  T  G+VR + F GLR DKPA+ +  E+  P A     +   SA  +
Sbjct: 1   MKPELVAEIEFAGWTADGLVRQAAFKGLREDKPAKEVQAEKPSPPAKTDTPEPGPSAKTR 60

Query: 554 PDSIGSAR-----IKISNPERVIDPSSG----ISKIELARFYAQI 589
           P     A+     + IS+P++ + P +G    ++K +LAR++  +
Sbjct: 61  PVRRKGAKAEVMGVLISSPDKPLWPDAGDGEPVTKEDLARYHEAV 105