Pairwise Alignments

Query, 1021 a.a., formate dehydrogenase, alpha subunit, proteobacterial-type from Pseudomonas stutzeri RCH2

Subject, 674 a.a., formate dehydrogenase H subunit alpha selenocysteine-containing from Methanococcus maripaludis S2

 Score =  195 bits (495), Expect = 1e-53
 Identities = 159/607 (26%), Positives = 258/607 (42%), Gaps = 146/607 (24%)

Query: 51  ICTYCSVGCGMLLYARGDGAINSHDHIFHVEGDPDHPVSRGSLCPRGAGVLDFIKSDSRV 110
           IC YC  GCG+ L  +    + ++           HPV+ G  C +G+   +F+  D R+
Sbjct: 9   ICPYCGTGCGVDLVVKDGTLVGTNPF-------KRHPVNEGKTCIKGSYCHEFVHRDDRL 61

Query: 111 RYPQVREPGTDEWKRISWDEALDRIARLMKDDRDRNFETHDDEGQLVNRWMTTSMVAASA 170
           + P +R+ G  E    SWDEAL+ I+  ++     N+   +               +++ 
Sbjct: 62  KTPLIRKNG--ELVEASWDEALELISGKLQ-----NYSPEE-----------VGFFSSAR 103

Query: 171 CTNETAYLTQKITRA-LGILKLDNQARVUHGPTVAGLAPSFGRGAMTNSWVDIRNANIIL 229
           CTNE  Y+ QK  R  +    +D+ AR+ H  TV GL  +FG GAMTNS  DI +A+ I 
Sbjct: 104 CTNEDNYVFQKFARTVIKTNNVDHCARL*HSATVVGLGQAFGSGAMTNSISDIEDADCIF 163

Query: 230 SMGGNSAEAHPVGFRWVMQAKERSDAILISIDPRYNRTTAVADYHAWIRTGTDIVFLGGL 289
            +G N+ E HP+  R V++AKE+   I++ IDPRY  T   AD +  +  GT+I  L  +
Sbjct: 164 IIGSNTFEQHPLIARRVVRAKEKGTKIIV-IDPRYTPTAKQADLYLQLLPGTNIAVLNAI 222

Query: 290 ISFLIENDRYAHEYVLHYTDAAHLVREGFEFNDGLFTGYDEERHQYDKATWNFDLDEQGF 349
           +  L++ +    E++ + T                  GY+E                   
Sbjct: 223 MHVLVKENLVDEEFIKNRT-----------------KGYEE------------------- 246

Query: 350 VRRDETLQHPRCVFQMMRKHYSRYTVEMVERVCGMPQAKVLQLWELLAQSAAPDKTMTIL 409
                           ++     YT E   ++ G+    +++  ++   + A     +IL
Sbjct: 247 ----------------LKTTLETYTPEYASKLSGVAPELIVEAAKMYGSANA----ASIL 286

Query: 410 YALGWTQHSIGAQMIRTGAMVQLLLGNMGMPGGGVNALRGHSNIQGLTDIGLLSNLLTGY 469
           Y +G TQ + G   +++   + ++ GN+G PG GVN LRG +N+QG  D+G L N+  GY
Sbjct: 287 YCMGITQFTTGVNNVKSCCNLAMITGNIGKPGTGVNPLRGQNNVQGACDMGALPNVFPGY 346

Query: 470 MTLPAAGAQNYDDYIKQKIRQPLLPNQVSYWKHYERFFVSMMKAFYGDAARAENNWCYDW 529
             +PA    N++ Y +              W                       N C D 
Sbjct: 347 QAVPA----NHEKYAEA-------------W-----------------------NTCVD- 365

Query: 530 LPKLSEPLYDVLYAVNDMTKGKMTGAFCQGFNILAAFPNKAKVLDGLSKLKWLVIMDPLA 589
            P +   + D+L    +  K      +  G N + + P+   V   L  L  L++ D   
Sbjct: 366 -PNVGLSIPDMLAKAGEQVK----CIYVMGENPMVSDPDIHHVEHALKSLDLLIVQDIFL 420

Query: 590 TETGEFWKNHGEFNDVDPSQIQTAVFRLPTTTFAEDDGSITNSSRWLQWHHQAAPPPGEA 649
           TET                  Q A   LP  ++AE DG+ +N+ R +Q  ++A   PGEA
Sbjct: 421 TETA-----------------QVADVVLPGASWAEKDGTFSNTERRIQKINKAVDSPGEA 463

Query: 650 KTDTAIL 656
             D  I+
Sbjct: 464 IADWKIV 470



 Score = 45.1 bits (105), Expect = 2e-08
 Identities = 38/131 (29%), Positives = 57/131 (43%), Gaps = 17/131 (12%)

Query: 893  EFPYAATTYRLTEHFHYWTTHVLLNAIVQP--EKFVEIGEVLAGELGIAAGEKVRVRSKR 950
            E+P   TT R+  H+H  T       +     E FVEI    A ++GI   +KV+V ++R
Sbjct: 559  EYPMTLTTGRIIFHYHTGTMTRRSKHMADEINEGFVEIHPEDAEKMGIKNKQKVKVSTRR 618

Query: 951  GHIDAVAVVTKRLRPLQVDGRTVHQVGIPIHWGFTGVARKAHLTNTLTPFVGDGNTQTPE 1010
            G +   A +T  ++           V +P H+  T         N LT    D N + PE
Sbjct: 619  GEVVVNAKITPNIKQ--------GVVFMPFHFAETA-------ANILTNPAQDPNCKIPE 663

Query: 1011 FKSFLVNVEKL 1021
            +K     VEK+
Sbjct: 664  YKVCAAKVEKI 674