Pairwise Alignments

Query, 330 a.a., tripartite ATP-independent periplasmic transporter solute receptor, DctP family from Pseudomonas stutzeri RCH2

Subject, 332 a.a., C4-dicarboxylate ABC transporter from Vibrio cholerae E7946 ATCC 55056

 Score =  305 bits (782), Expect = 8e-88
 Identities = 153/331 (46%), Positives = 229/331 (69%), Gaps = 6/331 (1%)

Query: 2   KPIITLAGVLLALAS--ACAQAEP--IVIKFSHVV-ADDTPKGKGALMFKRLAEERLAGQ 56
           KP+  +A  +LA+ S  A A  +P  IVIKFSHV   D  PKG  A + ++   E + G+
Sbjct: 3   KPLTLIAASILAVTSFNAAANCDPGEIVIKFSHVTNTDKHPKGIAASLLEKRVNEEMNGK 62

Query: 57  VRVEVYPNSTLFGDATELEALRNDEVQLLAPSLAKFEQYTKQLQVFDLPFLFDDIEAVNR 116
             ++V+PNSTL+ D   LEAL N +VQL APSL+KFE++TK+ ++FDLPFLF+D++AV+R
Sbjct: 63  ACMQVFPNSTLYDDDKVLEALLNGDVQLAAPSLSKFEKFTKKYRIFDLPFLFEDVDAVDR 122

Query: 117 FQKRAKGKQLLRSMEDKNITGLAYWHNGMKQLSATRMLRQPSDASGLSFRIQPSAVLEAQ 176
           FQ  AKG++L  +M  + + GL +WHNGMKQ+SA + +  P+DA GL FR+Q S VL AQ
Sbjct: 123 FQSSAKGEELKNAMTRRGVKGLEFWHNGMKQISANKPILVPADAKGLKFRVQASDVLVAQ 182

Query: 177 FGTVGASTQKIPFADVYDALRAGTVQGAENPWSNIYSKKMHTVQPYIIETDHGVLDYMVV 236
           F  +GA+ QK+ FA+ Y  L+   + G EN WSNIY +K   VQ    ET+HG+LDY+VV
Sbjct: 183 FEQIGANPQKMSFAETYGGLQTKVIDGQENTWSNIYGQKYFEVQDGTTETNHGILDYLVV 242

Query: 237 SNTRFWMGMPHKIRFELEAILDEVSFMVNREADELNRADRERIRQAGTSEIVALSPEERE 296
           +++++W G+P  +R +   IL+EV+   N E++++   +++ I +AG   +  L+PE+R+
Sbjct: 243 TSSKWWDGLPADVRDQFAKILNEVTIERNAESNKVEELNKQYIIEAG-GVVRTLTPEQRQ 301

Query: 297 RWREAMRPVWQQFEPVIGADIIKAAETVNRK 327
           +W +A++PVWQ+FE  IGAD+I+AA   N+K
Sbjct: 302 QWVDALKPVWQKFEKDIGADLIEAALAANQK 332