Pairwise Alignments

Query, 330 a.a., tripartite ATP-independent periplasmic transporter solute receptor, DctP family from Pseudomonas stutzeri RCH2

Subject, 336 a.a., periplasmic binding protein from Sinorhizobium meliloti 1021

 Score =  106 bits (265), Expect = 7e-28
 Identities = 66/255 (25%), Positives = 119/255 (46%), Gaps = 6/255 (2%)

Query: 51  ERLAGQVRVEVYPNSTLFGDATELEALRNDEVQLLAPSLAKFEQYTKQLQVFDLPFLFDD 110
           E   G++++ ++P+S L  D   L  LRN   +  + S            +  + F F D
Sbjct: 57  EETGGRLKINIFPSSQLGNDTETLSQLRNGATEFFSLSPLILSTLVPNAAISGIGFAFPD 116

Query: 111 IEAVNRFQKRAKGKQLLRSMEDKNITGLA-YWHNGMKQL-SATRMLRQPSDASGLSFRIQ 168
            + V +      G      +E K +  +   W NG +Q+ S+ + +  P D  G   R+ 
Sbjct: 117 YDTVWKAMDGELGAYARGEIEKKGLVPMEKIWDNGFRQITSSNKPINTPEDLKGFKIRVP 176

Query: 169 PSAVLEAQFGTVGASTQKIPFADVYDALRAGTVQGAENPWSNIYSKKMHTVQPYIIETDH 228
           PS + ++ F   GA+   I FA+VY AL  GTV G ENP +   + K++ VQ +   T+H
Sbjct: 177 PSPLWQSMFTAFGAAPTTINFAEVYTALSTGTVDGQENPLAIASTAKLYEVQKHCAMTNH 236

Query: 229 GVLDYMVVSNTRFWMGMPHKIRFELEAILDEVSFMVNREADELNRADRERIRQAGTSEIV 288
               + +++N + W  +P  IR      L+E +     +  ++N   RE++ Q+G    +
Sbjct: 237 MWDGFWMLANKQAWETLPEDIREIAAKHLNESAIAQRTDTAKVNDTVREQLTQSG----M 292

Query: 289 ALSPEERERWREAMR 303
             +  ++  +RE +R
Sbjct: 293 TFTDPDKAAFRETLR 307