Pairwise Alignments

Query, 330 a.a., tripartite ATP-independent periplasmic transporter solute receptor, DctP family from Pseudomonas stutzeri RCH2

Subject, 338 a.a., ABC transporter substrate-binding protein from Sinorhizobium meliloti 1021

 Score =  147 bits (371), Expect = 4e-40
 Identities = 88/311 (28%), Positives = 152/311 (48%), Gaps = 2/311 (0%)

Query: 11  LLALASACAQAEPIVIKFSHVVADDTPKGKGALMFKRLAEERLAGQVRVEVYPNSTLFGD 70
           L+    A A+     +KF+       P+  G   F  L +E+  G++ V+++P  TL GD
Sbjct: 18  LMTAGPALAEIRDQTVKFASANNKGHPQVTGMEKFAELVKEKSGGKIEVKLFPGGTLGGD 77

Query: 71  ATELEALRNDEVQLLAPSLAKFEQYTKQLQVFDLPFLFDDIEAVNRFQKRAKGKQLLRSM 130
              + AL+   +++   +        K+    DLPFLFD  E  ++      G  L+  +
Sbjct: 78  VQTVSALQGGVIEMTVLNAGILASNVKEFGAVDLPFLFDSGEEADKVMDGPFGTSLMERL 137

Query: 131 EDKNITGLAYWHNGMKQLSATR-MLRQPSDASGLSFRIQPSAVLEAQFGTVGASTQKIPF 189
               + G+AYW  G + L+  R  + +  D  GL  R   S +    F  +GA+   +P+
Sbjct: 138 PATGLVGVAYWELGFRNLTNNRHPVTKLEDIKGLKIRTIQSPIPVELFNALGANAVPLPY 197

Query: 190 ADVYDALRAGTVQGAENPWSNIYSKKMHTVQPYIIETDHGVLDYMVVSNTRFWMGMPHKI 249
            ++Y AL  GTV G ENP +NI + K + VQ Y+  T H     +V+ + +FW G+  + 
Sbjct: 198 TELYTALETGTVDGQENPSANIINAKFYEVQKYMTLTRHQYNPQIVLVSKKFWDGLNDEE 257

Query: 250 RFELEAILDEVSFMVNREADELNRADRERIRQAGTSEIVALSPEERERWREAMRPVWQQF 309
           +  L+    E      + + E + A  E IR+ G  E+  LS EE ++ R+A++P+ ++F
Sbjct: 258 KTVLQQAAVEARDFQRKVSREQDAAALEEIRKTG-MEVSELSAEETQKLRDAVKPMIEKF 316

Query: 310 EPVIGADIIKA 320
              IG + ++A
Sbjct: 317 SADIGQETVEA 327