Pairwise Alignments

Query, 1034 a.a., Cation/multidrug efflux pump from Pseudomonas stutzeri RCH2

Subject, 1082 a.a., Acriflavin resistance protein from Xanthomonas campestris pv. campestris strain 8004

 Score =  841 bits (2172), Expect = 0.0
 Identities = 470/1070 (43%), Positives = 666/1070 (62%), Gaps = 50/1070 (4%)

Query: 1    MNLSAPFIARPVATMLLSLAILLLGGVSFGLLPVSPLPNMDFPVITVQASLPGASPEIMA 60
            +  S  FI RP+AT LL   ILLLG + +  LPVS LP +D P + V    PGA+   MA
Sbjct: 1    VGFSTIFIRRPIATSLLMAGILLLGILGYRQLPVSALPEIDAPSLVVSTQYPGANATTMA 60

Query: 61   SSVATPLERSLGSIAGVSQMTSRSSQGSTRIIIQFDLDRDINGAARDVQAAINASRNLLP 120
            S V TPLER LG I+G+  MTS SS G + II+QF +DRDI+ AA+DVQAAI  +   LP
Sbjct: 61   SLVTTPLERQLGQISGLQMMTSDSSAGLSTIILQFSMDRDIDIAAQDVQAAIRQAT--LP 118

Query: 121  SGMRSMPTYRKINPSQAPIMVLSLTSEVLDKAELYDIGSTILAQKLSQVSGVGEIQVGGS 180
            S +   P Y ++NP+ A I+ L LTS+ L   E+      ILAQ+LSQV GVG + + G+
Sbjct: 119  SSLPYQPVYNRVNPADAAILTLKLTSDTLPLREVNRYADAILAQRLSQVPGVGLVSIAGN 178

Query: 181  SLPAVRVELQPQQLEQYGVSLDEVRQTIANGNVRRPKGMVEDADQHWQVRANDQLHQAAD 240
              PAVR+++ P QL   G++++ +R  +   NV  PKG +    Q + +  NDQL  AA 
Sbjct: 179  VRPAVRIQVNPAQLSNMGLTMESLRSALTQTNVSAPKGSLNGKTQSYSIGTNDQLTDAAQ 238

Query: 241  YTPLIIRYQDGAALRLGDVARVRDSVEDRYNSGFFNNEQAVLLIVNRQAGANIIETIEGI 300
            Y   II Y +GA +RL DVA+V D VE+   + + + + AVLL + RQ GANI++T+E I
Sbjct: 239  YRETIISYNNGAPVRLADVAKVVDGVENDQLAAWADGKPAVLLEIRRQPGANIVQTVEQI 298

Query: 301  RRELPALQAIMPGSVDLNIAMDRSPVIRATLHEAERTLLIAVGLVIVLVFLFLGRLRTAL 360
            R  LP LQ ++P  V L++  DR+  IRA++HE + TL++ + LV+ ++F+FL RL   +
Sbjct: 299  RSILPQLQGVLPADVHLDVFSDRTETIRASVHEVKFTLVLTIFLVVAVIFVFLRRLWATI 358

Query: 361  IPALAVPVSLVGTFAVMYMFGFSLNVLSLMALILAAGLVVDDAIVVLENIARHIDDGMPP 420
            IP++AVP+SL GTF VM   G SL+ LSLMAL++A G VVDDAIV++ENI R+I+ G   
Sbjct: 359  IPSVAVPLSLAGTFGVMAFAGMSLDNLSLMALVVATGFVVDDAIVMIENIVRYIEQGKSG 418

Query: 421  LKAAYVGTREVGFTLLSMNLSLVVVFVSILYMGGIVERLFREFSITLAAAILVSLLVSLT 480
             +AA +G R++GFT+LS+ +SLV VF+ +L M G+  RLF EF+  L+ A+++S+LVSLT
Sbjct: 419  PEAAEIGARQIGFTVLSLTVSLVAVFLPLLLMPGVTGRLFHEFAWVLSIAVVISMLVSLT 478

Query: 481  LTPMLCARWLKPHE-PEKEGRLQRWSHD--AHQW--LLRYYDRSLSWALRHRRITLLSLL 535
            LTPM+CA  LKP   PE E   +R + +   + W   +  Y+RSL W L H+ +TL   +
Sbjct: 479  LTPMMCAYLLKPDALPEGEDAHERAAAEGKTNLWTRTVGVYERSLDWVLDHQPLTLAVAI 538

Query: 536  ATIALNVVLYVQVPKTFLPQQDTGQITGFIRGDDGMSFQVMQPKMEIFRKAVLADPAVES 595
              +AL VVLYV +PK  LP+QDTG ITG ++ D  ++F  M+ + +    A+  DPAV  
Sbjct: 539  GAVALTVVLYVAIPKGLLPEQDTGLITGVVQVDQNVAFPQMEQRTQAVAAALRKDPAVTG 598

Query: 596  VAGFIGG---QGGINNAFMIVRLKPLNERGISAQKVIERIRKNQPKVPGGRMFLMADQDL 652
            VA FIG       +N   + + LK   +R    + V+ R++K    +PG  +FL   QD+
Sbjct: 599  VAAFIGAGSMNPTLNQGQLSIVLKTRGDRD-DLETVVARLQKAVSGIPGVALFLKPVQDV 657

Query: 653  QFGGGRQSSSAYAYTLLASDLNDLRTWVPQVTRALSDLPELTSIDANDGEGAQQISLKID 712
                 R +++ Y Y++   D  +L +W  ++T A+  LPEL  +D N     + + L ID
Sbjct: 658  TL-DTRVAATEYQYSMADVDSTELASWATRMTEAMRKLPELADVDNNLANQGRALELSID 716

Query: 713  RDAAKRLGIDMSTVTTLLNNAFSQRQISTIYESLNQYQVVMEIDPSYAQYPEVLEQIHV- 771
            RD A  LG+ M T+   L +AF QRQISTI+  LNQY+VV+E+ P +     ++ Q+ V 
Sbjct: 717  RDKASMLGVPMQTIDDTLYDAFGQRQISTIFTELNQYRVVLEVAPEFRSSTALMNQLAVA 776

Query: 772  ------------------------------------VTSDGRRVPLAAFARYERSLEEDR 795
                                                V   G  +PLAA A  + +     
Sbjct: 777  SNGSGALTGTNATSFGQVTSSNSSTATGVGNQNTGIVVGAGSIIPLAALAEAKVTNTPLV 836

Query: 796  VSHDGQFAAENIDFDLAPGVSLDQATLAIERAVAAIGMPSEVQGRLGGTGSAFQTTQEGQ 855
            VSH  Q  A  I F+LAPG SL QA  AIE+A A + +P++V     G  + F  +Q   
Sbjct: 837  VSHQQQLPAVTISFNLAPGHSLSQAVAAIEQARADLKIPTQVHAEFVGKAAEFTGSQTDI 896

Query: 856  PLMILGALLLVYIVLGILYESYIHPLTILSTLPSAGVGALLAIILTGDQFSLISLLGLFL 915
              ++L +++++YIVLG+LYESYIHPLTI+STLP AGVGALLA+++ G   S+  ++G+ L
Sbjct: 897  VWLLLASIVVIYIVLGVLYESYIHPLTIISTLPPAGVGALLALMVCGLSLSVDGIVGIVL 956

Query: 916  LIGVVKKNAILMIDLALQFERQDKLSPADSIHRACLLRFRPILMTTMAAILGALPLLLGG 975
            LIG+VKKNAI+MID A++  R+  ++  ++I RACLLRFRPI+MTT AA+LGALPL LG 
Sbjct: 957  LIGIVKKNAIMMIDFAIE-ARRTGVNAHEAIRRACLLRFRPIMMTTAAAMLGALPLALGT 1015

Query: 976  AEGAEMRQPLGLTIIGGLLLSQILTLYTTPVVYLYLDRLRHRFNSWRGVR 1025
              G+E+R+PLG+ I+GGLLLSQ++TLYTTPV+YLY++R   R   WR  R
Sbjct: 1016 GIGSELRRPLGIAIVGGLLLSQLVTLYTTPVIYLYMERAGERVRDWRARR 1065