Pairwise Alignments

Query, 447 a.a., amino acid carrier protein from Pseudomonas stutzeri RCH2

Subject, 476 a.a., sodium:alanine symporter family protein from Vibrio cholerae E7946 ATCC 55056

 Score =  307 bits (787), Expect = 4e-88
 Identities = 182/446 (40%), Positives = 262/446 (58%), Gaps = 11/446 (2%)

Query: 4   LNNLVNSVNGLVWGPPMLVLILGTGLFLMIFLKFMPLTRIPTGFALMWRGRTKGDEATGE 63
           + +L+N +N L+WG  ++ L++G G++  + L F+        F ++   R K D A   
Sbjct: 1   MTDLINLMNDLLWGSILVYLLVGVGIYFTLRLGFIQFRHFTHTFTVLKNSR-KADNAG-- 57

Query: 64  ISPFQALMTSLAATVGTGNIAGVATAIFLGGPGALFWMWCTALVGMATKYCEVVLAVHYR 123
           IS FQAL TSLAA VGTGN+AGVA A+  GGPGA+FWMW  A++GMAT + E  LA  Y+
Sbjct: 58  ISSFQALCTSLAARVGTGNMAGVAVALTAGGPGAIFWMWLIAMLGMATSFAESTLAQLYK 117

Query: 124 EKDDRGEHVGGPMYAIKNGLGKKWIWLGTAFAIFGGLAGFGIGNMVQVNSMAHALETTFA 183
            +D  G + GGP Y ++ GLG +W  +G  F+IF  +A   + N VQ NS+ +A++T F 
Sbjct: 118 TRDKDGNYRGGPAYYMEKGLGMRW--MGVLFSIFLIIAFGLVFNAVQANSITNAMKTAFG 175

Query: 184 VPLWATGLVTMVIVGLVILGGIRRIGVVAASLVPFMCLAYLIAAAVVLVVNVSAIPAAFD 243
                 G+  +++   VI GGIR+I   A  +VPFM  AYL  A  V+V+N   +P A  
Sbjct: 176 FEPMLIGIGIVLLTAFVIFGGIRKIARTAELIVPFMAFAYLAIALFVVVMNYEKVPDAIS 235

Query: 244 LIFTHAFTPIAATGGFAGAAVMAAIRFGVARGIFSNEAGLGTAGIAQAAGT--TTSSVRS 301
           LIF  AF    A  G  G A+  A+  GV RG+FSNEAG+G+A  A A+ T         
Sbjct: 236 LIFKSAFGLQEAAAGGLGYAIAQAMINGVKRGLFSNEAGMGSAPNAAASATPYPPHPASQ 295

Query: 302 GMIGMLGTFIDTIIVCSMTGLAIICTGVWT-SGE-SGAALSAAAFESAMPGIGGIILTIA 359
           G + MLG FIDTI++C+ T   I+ +G +   GE +G  L+  A  S +   GGI +  A
Sbjct: 296 GYVQMLGVFIDTIVICTATVAIILMSGEYVPHGELTGIELTQRALSSQVGDWGGIFIAFA 355

Query: 360 LVVFAFTTILGWSYFGEKCWEFLV--GTRAIWPFRVIWVLAVPFGAIAQLDFAWLLADTL 417
           +  FAFT+I+    + E    FL     + +  FR++++  V FG++A L   W +AD  
Sbjct: 356 IFFFAFTSIIANYSYAETNLIFLEHNNKKGLVLFRLVFLGMVMFGSLATLPTVWAMADVS 415

Query: 418 NGLMAIPNLISLLLLSPVVVKLTKEY 443
            GLMAI NL+++LLLS +V+KL K+Y
Sbjct: 416 MGLMAIVNLVAILLLSGIVIKLAKDY 441