Pairwise Alignments

Query, 270 a.a., exodeoxyribonuclease III from Pseudomonas stutzeri RCH2

Subject, 269 a.a., exonuclease III (RefSeq) from Shewanella loihica PV-4

 Score =  374 bits (960), Expect = e-108
 Identities = 172/266 (64%), Positives = 213/266 (80%), Gaps = 2/266 (0%)

Query: 1   MKIVSFNINGLRARPHQLSAIIEKHQPDVIGLQETKVSDEQFPQAEIEALGYHVHYHGQK 60
           MKIVSFNINGLRAR HQL A+I+ H PD+IGLQETKV DE FP AE+EA+GY VHYHG K
Sbjct: 1   MKIVSFNINGLRARLHQLQALIDSHSPDIIGLQETKVHDEAFPLAEVEAMGYQVHYHGGK 60

Query: 61  GHYGVALLSRQAPLEIHKGFPSDGEESQKRFIWGRFADANGQPVTVMNGYFPQGESRAHP 120
            HYGVA+LS+  P+++ KGFP+D +E+Q+R I G F  ANG+ +TV+NGYFPQGE+ +H 
Sbjct: 61  AHYGVAMLSKLPPVKVQKGFPTDDDEAQRRMIMGTFTQANGRQLTVLNGYFPQGENISHE 120

Query: 121 VKFPAKTKFYADLQALLEQRFSPDEALALMGDFNISPQDCDIGIGEVNAKRWLRTGKCSF 180
            K+PAK KFY DL   L+Q  SPDE +A++GD NISP D DIGIGEVNAKRWL+TGKCSF
Sbjct: 121 TKYPAKRKFYQDLMHYLQQHHSPDEDIAIIGDINISPIDLDIGIGEVNAKRWLKTGKCSF 180

Query: 181 LPEEREWLERIKGWGLQDSFRTLNPEVVDRFSWFDYRSRGFEDDPRRGLRIDYILTTHAL 240
            PEEREWL+ +  WGL D+FR L+P   +R+SWFDYRS+GF+D+  RGLRID IL T +L
Sbjct: 181 QPEEREWLQTLLDWGLVDTFRQLHPTRSERYSWFDYRSKGFDDN--RGLRIDVILATPSL 238

Query: 241 HERVTDCGVDYDIRAMEKPSDHCPVW 266
            ER+T+  VDYD+R ++KPSDH P+W
Sbjct: 239 AERLTESDVDYDLRGIDKPSDHAPIW 264