Pairwise Alignments

Query, 339 a.a., Transcriptional regulators from Pseudomonas stutzeri RCH2

Subject, 335 a.a., DNA-binding transcriptional regulator CytR from Vibrio cholerae E7946 ATCC 55056

 Score =  149 bits (377), Expect = 8e-41
 Identities = 102/333 (30%), Positives = 163/333 (48%), Gaps = 12/333 (3%)

Query: 13  TLSDVARSAGCSLMSASRALSQPDLVSDALRERVELAVKALGYVPHPAARSLASSRSNLV 72
           T+ DVA+ AG S  + SRAL  P+ VS + R+RVE AV   GY P+  AR+L  + S  +
Sbjct: 3   TMKDVAQLAGVSTATVSRALMNPEKVSSSTRKRVEEAVLEAGYSPNSLARNLRRNESKTI 62

Query: 73  AVIIPSLSNAVFVDTVEAIQRVLMPAGYEMMIGVSHYRPEEDERLLRAYLAHQPAGLLLT 132
             I+P + +  F + +  I+   M  GY +++G S  +   +   +      Q  G+LL 
Sbjct: 63  VAIVPDICDPYFSEIIRGIEDAAMEHGYLVLLGDSGQQKRRENSFVNLVFTKQADGMLLL 122

Query: 133 GFERSDAARAVLANYTAPMVTLMELSERPDDYCVGFSQLEAGVAMTRTLLERGYRHVAFA 192
           G +              PMV   E +   +   V    L +       L + G++ +A  
Sbjct: 123 GTDLPFDVSKPEQKNLPPMVMACEFAPELELPTVHIDNLTSAFEAVNYLTQLGHKRIAQI 182

Query: 193 AAQLDPRTLQ-RAEGYRQAMRQAGRYEPTLELLTPQLSSIG-----LGAELLDRLLAQHP 246
           +        Q R +GY+QA+R+AG        + P   + G      GA+ + +LLA   
Sbjct: 183 SGPQHAALCQFRHQGYQQALRRAG------ITMNPTYCTFGDFTFEAGAKAVRQLLALPE 236

Query: 247 QIDAVFFNNDDLALGALFRAHQLGLEVPGRLAIAGFNDLPAAAWMHPALSTVRTRRGEIG 306
           Q  A+F +ND +A+GA+  A +LGL VP  L++ GF+D+  A +  P L+T+   R EIG
Sbjct: 237 QPTAIFCHNDTMAIGAIQEAKRLGLRVPQDLSVVGFDDIQFAQYCDPPLTTISQPRYEIG 296

Query: 307 ELAAQMLLSLMRGQQPAERCIDVGFEVVMRDSA 339
             A  M+L L+RG         +  ++V+R+SA
Sbjct: 297 RQAMLMMLELLRGHDVRAGSRLLETKLVVRESA 329