Pairwise Alignments

Query, 425 a.a., D-gluconate TRAP transporter, large permease component (from data) from Pseudomonas stutzeri RCH2

Subject, 425 a.a., dedA-like protein from Sinorhizobium meliloti 1021

 Score =  466 bits (1200), Expect = e-136
 Identities = 236/424 (55%), Positives = 312/424 (73%)

Query: 1   MTVVVFLSSLLGFMTLGMPIAFALLLTGSVLMWYLDFWDVQLLAQNLQAGADSFPLLAVP 60
           MT+VVF+ SLLG M +G+P+AF+L+  G VLMWY+  ++ Q++AQN+ AGAD+F LLA+P
Sbjct: 1   MTLVVFIVSLLGAMAIGVPVAFSLMFCGVVLMWYMGMFNTQIIAQNMIAGADTFTLLAIP 60

Query: 61  FFILAGELMNAGGISRRIIAMAQAYFGHKRGGLGYVAIAASVLLASMSGSALADTAALAT 120
           FFILAGELMNAGG+SRRII  A A  GH RGGLG VAI A+V++AS+SGSA ADTAALA 
Sbjct: 61  FFILAGELMNAGGLSRRIIDFAIACVGHIRGGLGIVAIMAAVIMASISGSAAADTAALAA 120

Query: 121 LLLPMMRERGYPLSSSSGLVAAGGIIAPIIPPSMPFVIYGVVTGTSISQLFLAGMVPGLI 180
           +L+PMM + GY +  S+GL+AAGG+IAP+IPPSM F+++GV    SI+QLF+AG+VPGLI
Sbjct: 121 ILIPMMAKAGYNVPRSAGLIAAGGVIAPVIPPSMAFIVFGVAANVSITQLFMAGIVPGLI 180

Query: 181 MGMGLIVAWTLIARRIDEPKQEKASAAERRRVLVDGAAALMLPVIIVGGLRGGLFTPTEA 240
           MG+ L+  W L+ R+ D     +    ER         AL +PVII+GG++ G+ TPTEA
Sbjct: 181 MGIALVATWLLVVRKDDIQPLPRTPMKERVGATGRALWALGMPVIILGGIKAGVVTPTEA 240

Query: 241 AVVAAVYALAVSTLLYRELNWAGLVEVLTRASRTTASVMFLCAAATVSAYMITLAQLPDE 300
           AVVAAVYAL V  ++YREL    L  V+ +A++TTA +MFL  AA VS+++IT A +P E
Sbjct: 241 AVVAAVYALFVGMVIYRELKPRDLPGVILQAAKTTAVIMFLVCAALVSSWLITAANIPSE 300

Query: 301 IAAMLGPLAQDPKLLMVAIMLLMIAVGMVLDLTPTILILGPVLAPIAIKAGIDPVYFGVM 360
           I   + PL   P LLM  IML+++ VG  LDLTPTILIL PVL PI  +AGIDPVYFGV+
Sbjct: 301 ITGFISPLIDRPTLLMFVIMLVVLVVGTALDLTPTILILTPVLMPIIKQAGIDPVYFGVL 360

Query: 361 FVLIGSIGLITPPVGTVLNVVGGIGRLRMETLVRGVMPFFLIYLVIVGLLIAVPSIITVP 420
           F++   IGL+TPPVG VLNVV G+GR+ +  ++ GV PF +  ++++ LL+  P I+ VP
Sbjct: 361 FIMNTCIGLLTPPVGVVLNVVSGVGRVPLGKVIVGVTPFLVAQILVLFLLVLFPDIVIVP 420

Query: 421 LAWL 424
             WL
Sbjct: 421 ARWL 424