Pairwise Alignments

Query, 425 a.a., D-gluconate TRAP transporter, large permease component (from data) from Pseudomonas stutzeri RCH2

Subject, 425 a.a., hypothetical protein from Sinorhizobium meliloti 1021

 Score =  269 bits (688), Expect = 1e-76
 Identities = 143/396 (36%), Positives = 233/396 (58%), Gaps = 2/396 (0%)

Query: 7   LSSLLGFMTLGMPIAFALLLTGSVLMWYLDFWDVQLLAQNLQAGADSFPLLAVPFFILAG 66
           +++ LG   LG P+ +A+LL  S+L   ++     LLAQ +    DSFPL+AVP FI  G
Sbjct: 6   VAAFLGLFMLGFPVVYAILLP-SILYVLVEGLPFGLLAQRITYALDSFPLVAVPLFIFVG 64

Query: 67  ELMNAGGISRRIIAMAQAYFGHKRGGLGYVAIAASVLLASMSGSALADTAALATLLLPMM 126
            LMN  GI+ RI   A    G   GGL  V +  S++ + MSG+ALAD   L  + +  M
Sbjct: 65  NLMNLSGITDRIFRFAYTLVGRMPGGLAQVNVFGSLIFSGMSGAALADIGGLGRIEIDAM 124

Query: 127 RERGYPLSSSSGLVAAGGIIAPIIPPSMPFVIYGVVTGTSISQLFLAGMVPGLIMGMGLI 186
           ++RG+  S +  + AA   + PI PPS+P ++YG VT  SI QL +AG++P ++    L+
Sbjct: 125 KKRGFDPSFAGAVTAASATLGPIFPPSIPLIVYGSVTSVSIVQLLVAGIMPAVLCTALLM 184

Query: 187 VAWTLIARRIDEPKQEK-ASAAERRRVLVDGAAALMLPVIIVGGLRGGLFTPTEAAVVAA 245
           +   ++A R    + E+  +A E    LV    A++ P ++VGG+  G FTPTEAA + A
Sbjct: 185 LTVLIVAIRHGHARAERWPTAGELVGTLVPALPAILAPALMVGGMTAGAFTPTEAAAITA 244

Query: 246 VYALAVSTLLYRELNWAGLVEVLTRASRTTASVMFLCAAATVSAYMITLAQLPDEIAAML 305
           VY + +S +LYREL  A L       +R++++++ + A+A +  +++ + Q+P   AA L
Sbjct: 245 VYVIFISGVLYRELTPAHLWHSAVLTARSSSAILIIVASAALFGWILAVEQVPQTFAAAL 304

Query: 306 GPLAQDPKLLMVAIMLLMIAVGMVLDLTPTILILGPVLAPIAIKAGIDPVYFGVMFVLIG 365
              ++DP +L++   L+    GM LD T   L+L P++AP  + AG+DPV  G++ +   
Sbjct: 305 LGWSKDPLMLLIIANLIFFVAGMFLDSTTATLLLVPIIAPPLVMAGVDPVQLGIVTIFNL 364

Query: 366 SIGLITPPVGTVLNVVGGIGRLRMETLVRGVMPFFL 401
            +GL+TPP+G  L +V  I ++ +  L+R ++PF++
Sbjct: 365 MLGLLTPPMGLSLFLVSDIAKVSIRQLLRALVPFYI 400