Pairwise Alignments

Query, 425 a.a., D-gluconate TRAP transporter, large permease component (from data) from Pseudomonas stutzeri RCH2

Subject, 433 a.a., c4-dicarboxylate permease from Klebsiella michiganensis M5al

 Score =  282 bits (722), Expect = 1e-80
 Identities = 144/418 (34%), Positives = 261/418 (62%), Gaps = 7/418 (1%)

Query: 4   VVFLSSLLGFMTLGMPIAFALLLT--GSVLMWYLDFWDVQLL--AQNLQAGADSFPLLAV 59
           ++   S    + +G+PI+F++ +   GS+L+ +   WD+ ++  +Q L  G D+F LLA+
Sbjct: 7   LMLFGSFFILVFIGVPISFSIGIATVGSMLLMFP--WDIAVITVSQRLANGLDNFALLAI 64

Query: 60  PFFILAGELMNAGGISRRIIAMAQAYFGHKRGGLGYVAIAASVLLASMSGSALADTAALA 119
           PFFI AG LMN+GGI+ R+I +AQ   G   G LG+V + A+++  S+SGSA+A  AA+ 
Sbjct: 65  PFFIFAGTLMNSGGIAIRLINLAQVMVGRVPGSLGHVNVLANMMFGSISGSAVAAAAAVG 124

Query: 120 TLLLPMMRERGYPLSSSSGLVAAGGIIAPIIPPSMPFVIYGVVTG-TSISQLFLAGMVPG 178
             L P+   +GY  + S+ +  +  I   +IPPS   +++ +  G  S++ LF+AG +PG
Sbjct: 125 GTLNPIQTRKGYDPAFSTAVNVSSCITGLLIPPSNVLIVFSLTAGGVSVASLFMAGYLPG 184

Query: 179 LIMGMGLIVAWTLIARRIDEPKQEKASAAERRRVLVDGAAALMLPVIIVGGLRGGLFTPT 238
           ++MG+ ++V   +IA+R   P  E+ + A+  +   D   +L+L +I++GG+ GG+FT T
Sbjct: 185 ILMGLAIMVVCAIIAKRRGYPVSERPTCAQAAKAFFDALPSLLLVIIVMGGILGGIFTAT 244

Query: 239 EAAVVAAVYALAVSTLLYRELNWAGLVEVLTRASRTTASVMFLCAAATVSAYMITLAQLP 298
           EA+ +A VY   +S L+YRE+ W  L +++  +   T+ V+ L   +   ++ +T A +P
Sbjct: 245 EASAIAVVYTFILSVLIYREVKWRDLPKLILESVVMTSIVLLLIGFSVGMSWAMTNADIP 304

Query: 299 DEIAAMLGPLAQDPKLLMVAIMLLMIAVGMVLDLTPTILILGPVLAPIAIKAGIDPVYFG 358
             I+  L  ++++P ++++ I ++++ VG+ +D+TP +LI  P+  PIA   G+DPV+FG
Sbjct: 305 YMISDALMGISENPVVILLLINIVLLIVGIFMDMTPAVLIFTPIFLPIAQDLGMDPVHFG 364

Query: 359 VMFVLIGSIGLITPPVGTVLNVVGGIGRLRMETLVRGVMPFFLIYLVIVGLLIAVPSI 416
           +M V    IGL+TPPVG+ L V   I  ++++ L++ ++PF+   L+ + +++ +P I
Sbjct: 365 IMMVANLCIGLLTPPVGSALFVGCSISGVKIQQLIKPLLPFYAALLIALMMIVYIPQI 422