Pairwise Alignments

Query, 326 a.a., TRAP transporter solute receptor, TAXI family from Pseudomonas stutzeri RCH2

Subject, 335 a.a., C4-dicarboxylate ABC transporter substrate-binding protein from Vibrio cholerae E7946 ATCC 55056

 Score =  129 bits (325), Expect = 8e-35
 Identities = 100/321 (31%), Positives = 156/321 (48%), Gaps = 13/321 (4%)

Query: 13  TLAGALASV-LASTSVLAQERFVTIGTGGQTGVYYTAGQSVCRFLNRAEVKPA--IKCNA 69
           TL  A+ S  L   +  A+ER   + T    G YY  G ++   L + ++ P+     +A
Sbjct: 9   TLLAAITSFGLIGGAYAAEERSYILATASTGGTYYPVGVALAT-LTKVKLTPSYHFSLSA 67

Query: 70  PSTAGSVTNIVSLHKGEYDFGFIQSDHQHKALQGLAPFDKEGAVELRAVFSLQSEILTVV 129
            S+AGS  N+  ++  E  F  +Q  +   A  G  P+  E   +LR+V  L   +   +
Sbjct: 68  ISSAGSGENVKLMNDNEAQFAILQGLYGAWAWAGEGPY-AERQNQLRSVSMLWQNVEHFI 126

Query: 130 VRNDSG----ITDLAGLEGKRVNIGVPGSGSRDTFEEVMQAKGWTNASFALAAELKPAEM 185
           VR+D      I DLA ++GK+ +IG   SG+  +  ++M+  G    +F LA  L     
Sbjct: 127 VRSDLAPTGTIADLASMKGKKFSIGSKNSGTEFSGRQIMKGVGVDPDTFNLAY-LGYGGS 185

Query: 186 ASALGDNNLDAITYVVGHPSGAIQEALTNVKG--RIIPVQGAEIDSLLAKADYYSAVEIP 243
           ASAL +  +D +    G P GA+ +A   +    +I+     +I       + ++  +IP
Sbjct: 186 ASALQNGTIDGMNTPAGVPVGAVTQAFAAMGNDIKILSFTDEQIKQANGNYNLWTKFDIP 245

Query: 244 AGLYPGVDGAIPSIGGKAVLATTSKTDPEVVYQLVKSVFDNLDRFKRLHPAFADLKAEDM 303
           A  YPGVD  I +I     LA  +    E VYQL K++++NL   + +H A  D+  E  
Sbjct: 246 ANTYPGVDKTITTIAQPNFLAVRTDISEEDVYQLTKAMYENLAFLQGIHKATKDMAIEKA 305

Query: 304 IRVGLTAPLHEGAERYYKEKG 324
           I  GL  PLH GA RYY+E G
Sbjct: 306 IE-GLPMPLHAGAARYYQEVG 325