Pairwise Alignments

Query, 326 a.a., TRAP transporter solute receptor, TAXI family from Pseudomonas stutzeri RCH2

Subject, 328 a.a., C4-dicarboxylate ABC transporter substrate-binding protein from Vibrio cholerae E7946 ATCC 55056

 Score =  300 bits (767), Expect = 4e-86
 Identities = 147/310 (47%), Positives = 202/310 (65%), Gaps = 1/310 (0%)

Query: 16  GALASVLASTSVLAQERFVTIGTGGQTGVYYTAGQSVCRFLNRAEVKPAIKCNAPSTAGS 75
           GA+A+ +  + V + + F+TIGTG  TGVYY  G ++C+ +N+      I+C+  ST GS
Sbjct: 16  GAIAAAVIGSGVASAQDFITIGTGSVTGVYYPTGGAICKLVNKDRKDHNIRCSVESTGGS 75

Query: 76  VTNIVSLHKGEYDFGFIQSDHQHKALQGLAPFDKEGAVE-LRAVFSLQSEILTVVVRNDS 134
           + N+ ++  GE DFG +QSD Q+    G + F ++G  + LRAVFS+ +E   ++ R DS
Sbjct: 76  IYNVNTIRSGELDFGIVQSDWQYHGYNGTSEFAEQGPYKKLRAVFSMHTEPFNIIARADS 135

Query: 135 GITDLAGLEGKRVNIGVPGSGSRDTFEEVMQAKGWTNASFALAAELKPAEMASALGDNNL 194
           GI ++  L GKRVNIG PGSG R T + VM A GW N SF LAAELK +E + AL DN +
Sbjct: 136 GIENVKDLAGKRVNIGNPGSGDRATMQVVMDAFGWNNDSFKLAAELKGSERSQALCDNKI 195

Query: 195 DAITYVVGHPSGAIQEALTNVKGRIIPVQGAEIDSLLAKADYYSAVEIPAGLYPGVDGAI 254
           DA  Y+VGHP+GAI+EA T+   +++P  G EI+ ++A   YY+   +PAG+Y G D  +
Sbjct: 196 DAFIYMVGHPNGAIKEATTSCAAKLVPATGPEIEKIVANNPYYAYSVVPAGMYSGTDQEV 255

Query: 255 PSIGGKAVLATTSKTDPEVVYQLVKSVFDNLDRFKRLHPAFADLKAEDMIRVGLTAPLHE 314
            S G  A L TT +    VVY L K+VF+N D F RLHPAFA+LK EDM+  G + PLH 
Sbjct: 256 KSFGVAATLVTTEEVSEAVVYNLTKAVFENFDTFTRLHPAFANLKKEDMVTAGNSIPLHP 315

Query: 315 GAERYYKEKG 324
           GA +YYKE G
Sbjct: 316 GAVKYYKEAG 325