Pairwise Alignments

Query, 504 a.a., Uncharacterized protein conserved in bacteria from Pseudomonas stutzeri RCH2

Subject, 509 a.a., tripartite tricarboxylate transporter permease from Vibrio cholerae E7946 ATCC 55056

 Score =  425 bits (1092), Expect = e-123
 Identities = 215/501 (42%), Positives = 327/501 (65%), Gaps = 10/501 (1%)

Query: 4   LNFLMQGFDVATRPTNLLVALFGAFVGTIVGLLPGLGPINGVALLLPLAFALGLPPETAL 63
           L+ ++QG   A  PTNL++ + G FVGT +G+LPGLGPI+ +AL++P+ +  GL P + L
Sbjct: 2   LDGILQGLATAVMPTNLMMVMIGCFVGTFIGMLPGLGPISAIALMIPITY--GLEPASGL 59

Query: 64  ILLAAVYLGCEYGGRISAILLNVPGDAAAVMTTLDGYPLARQGKAGIALSLSAVSSFVGS 123
           IL+A VY G  +GG  S+IL+N PG ++ V+T  DGYP+A++G+AG AL+L+A +SF G 
Sbjct: 60  ILMAGVYYGAIFGGSTSSILINAPGCSSTVVTAFDGYPMAQKGQAGKALALAAYASFTGG 119

Query: 124 TIATCGVVLFAPLLAKWAVAFGPAEYFVLMIFAIACLGGMVGD-KPVKTLMAALMGLALA 182
           T++   ++  AP LAK +++F  ++YF LM+  ++ +    G  + +K  M  ++GL L+
Sbjct: 120 TLSAIMLLFAAPALAKVSLSFQSSDYFALMLVGLSAVAAFAGKGQVIKAWMMTVLGLMLS 179

Query: 183 TVGVDSTTGVYRFTFGSVSLSDGIQFVIVVIGFFSVSEILLMLEKTHSG-----QKAVKA 237
           TVG+D   GV RFTFG   L DG  F+++ +  F++ E L+ + K  +      Q+ +K 
Sbjct: 180 TVGIDKGIGVERFTFGLTDLMDGFSFLLLAMATFALGETLMGILKPDADNSANEQEQMKN 239

Query: 238 SGRLLFNFKEFCLTFWTMVRSAVAGFVIGTLPGAGATIASAMTYMSEKRMA--GDKGRFG 295
            G +    +E        +RS++ GF  G LPGAGATIA+ + Y  E+ +A    K  FG
Sbjct: 240 IGSMKLTKEEVKEAAPVSLRSSILGFFTGVLPGAGATIAAFLAYGMERNLAPKAKKEEFG 299

Query: 296 DGDLRGLAAPEAANNASACGSLIPMLTLGVPGSGTTAVMIGALTLYNITPGPLLFEQQPD 355
            G LRGL APE+ANNA++ GS +P+LTLG+PGSGTTA+M+GAL  Y I PGP LF   PD
Sbjct: 300 QGSLRGLVAPESANNAASSGSFVPLLTLGIPGSGTTAIMLGALIAYGIQPGPRLFVDHPD 359

Query: 356 VVWGLIASLFIGNVILLVMNIPLVGLFSRMLSVPNWVLVPTITVISMVGVYSVHSTVFDL 415
           + W +I S+++GN++LL++N+PL+   S++L+VP  VL+P I   S+ GVY V     D+
Sbjct: 360 IFWSVIISMYVGNIVLLILNLPLIPYISKLLAVPRTVLLPMILFFSITGVYLVSFNTMDV 419

Query: 416 VLMVGLGVFGYLLRKLDFPLSALILGFVLGEMMEDNLRRALSISNGELGILYGSPITLAL 475
            +M+ + +    LR  +FPL+ L+LGF+LG +ME+NLRRAL I++GE+  L+  PITLA 
Sbjct: 420 YVMILVAMGAIALRLANFPLAPLLLGFILGGLMEENLRRALIITDGEISFLWERPITLAF 479

Query: 476 WALTVAMLAMPGLRWYLKRRR 496
             L +  L  P     ++R++
Sbjct: 480 TVLAIVTLLSPLFGRLMERKK 500