Pairwise Alignments

Query, 544 a.a., Methyl-accepting chemotaxis protein from Pseudomonas stutzeri RCH2

Subject, 564 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

 Score =  283 bits (724), Expect = 1e-80
 Identities = 169/556 (30%), Positives = 288/556 (51%), Gaps = 21/556 (3%)

Query: 9   ISKRLWLIPVVAVVMLFILGLLMIQQVRSDLYRGKQESTRH---VVEAASGVFEHYRKLE 65
           +  R  L+ +  + ++ I  L+M    +S L   ++E   +   +++A     + Y  + 
Sbjct: 10  LRSRTKLLLLTVIPLIVITALVMAVNYQSGLSTLQKELENYRTDLIDAKKKELQAYLMMG 69

Query: 66  LSGAMTTAEAQKAAIEQ------IRLLRYDGQDYYWINDLGPTMIMHPMQPKLDGQDLSK 119
           ++      E+ KA   Q      ++ +R+D   Y++  D      +H ++P+L+G++L  
Sbjct: 70  VTAVKPLYESDKAGENQAQAKQILKAMRFDSDGYFFAYDSQGVNTLHAIKPELEGKNLYG 129

Query: 120 IKDPEGKELFNEMVRIAQRDGAGLVDYMWAKPGEENPVPKISYVQLFKPWGWIIGSGIYV 179
           +KD  G  +   ++  A + G G + + W KP      PK+ Y +    W W++G+GIY+
Sbjct: 130 MKDENGVAVIAGLID-ASKTGDGFLYFSWHKPTINAQAPKLGYAEYLPKWDWVLGTGIYI 188

Query: 180 DDVEQEFWNYLTR---------FSLIGLLISAIMAVLVAI--LIRSIVRPLRHTMAAMAN 228
           DDV+ +   +  +          S IGL +  ++  ++A+  L+   + PL+H ++++  
Sbjct: 189 DDVDTQVAEFRAQREADLYDQMISAIGLSVVGLVFTIIAVSVLVSRGIAPLQHVVSSLQA 248

Query: 229 IASGEADLTRTLDVSGNDELTTLGRDFNRFTQKLRTVVGQLFETAGALDQSSRSLSQLSG 288
           +A+G  DLT  + V   DE+  + + FN F  KL  ++  +  +A  ++ +++ L Q + 
Sbjct: 249 VAAGGGDLTARIKVESQDEIGDVAKAFNAFMDKLHPLMTDIRASANTVEAAAQELDQQTS 308

Query: 289 QAHEQSQQQMLQMEQVATAINEVTYAVQEVAKNAEHASSEVGSAENQAGQGQRNIETSLQ 348
           QA  +     L+ ++V  A+ E++   +EVA N    +  + SA +Q    Q+ +  ++ 
Sbjct: 309 QASHKMDGHCLETDKVVAAVTEMSATAREVASNTYSTAQAIESANSQIAVAQKEVNLAID 368

Query: 349 QIDELSATIGQAVDVIQSLADETTKIGSVLEVIGSIAEQTNLLALNAAIEAARAGEQGRG 408
            I EL   + Q    +  L+ +  KI  VL+VIG IAEQTNLLALNAAIEAARAGEQGRG
Sbjct: 369 GIGELVNEVNQTSAAVGDLSQQAAKITQVLKVIGDIAEQTNLLALNAAIEAARAGEQGRG 428

Query: 409 FAVVADEVRLLAQRTQQSTAEIHGMIERLQKNSGAAVNVIMESNRASQLTVEQASQAGES 468
           FAVVADEVR LA RTQ ST EI  M+  L +    AV  +  S    + T  ++ Q  ES
Sbjct: 429 FAVVADEVRSLASRTQNSTKEIGEMLNALHQGVSKAVQSMNISQERGEKTALESVQIKES 488

Query: 469 LGEIAQALRNLSGLNASIASATLQQSHVVEDINQNVTQAAGLAQESTLAAEQSSEAGKQL 528
           L  I++A+  +  +    ASA  QQS V EDINQN+     +  E + + +Q+      L
Sbjct: 489 LAGISKAVSLIHDMGIQTASAAEQQSAVAEDINQNLVAIQQIVNELSESFKQTESVSASL 548

Query: 529 GELAGQLNRLLSQFRV 544
                Q+  L+  F++
Sbjct: 549 SHSGQQMGTLVGHFKL 564