Pairwise Alignments

Query, 544 a.a., Methyl-accepting chemotaxis protein from Pseudomonas stutzeri RCH2

Subject, 640 a.a., Histidine kinase, HAMP region:Bacterial chemotaxis sensory transducer from Pseudomonas syringae pv. syringae B728a

 Score =  258 bits (658), Expect = 6e-73
 Identities = 140/347 (40%), Positives = 225/347 (64%), Gaps = 3/347 (0%)

Query: 199 LISAIMAVLVAILI-RSIVRPLRHTMAAMANIASGEADLTRTLDVSGNDELTTLGRDFNR 257
           L++ I+ ++ A++I R I RPLR T+A +  IASG  DLT+TL V+ +DEL  L +   R
Sbjct: 296 LLAIILGIIAAVIITRQITRPLRETLAVVDRIASG--DLTQTLAVTRSDELGVLQQGIQR 353

Query: 258 FTQKLRTVVGQLFETAGALDQSSRSLSQLSGQAHEQSQQQMLQMEQVATAINEVTYAVQE 317
               LR ++G + ++   +  ++  LS ++ Q       Q ++ +QVATA++E++  V E
Sbjct: 354 MGTTLRELIGGIRDSVVQIASAAEELSAVTEQTSAGVNSQKVETDQVATAMHEMSATVAE 413

Query: 318 VAKNAEHASSEVGSAENQAGQGQRNIETSLQQIDELSATIGQAVDVIQSLADETTKIGSV 377
           VA+NAE AS    +A+ +A  G + +  ++ QI+ L+  +G++VD +  L  E+ KIG V
Sbjct: 414 VARNAEQASQAASNADREARDGDKVVGEAIAQIERLANEVGRSVDAMTELEQESDKIGKV 473

Query: 378 LEVIGSIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRLLAQRTQQSTAEIHGMIERL 437
           ++VI ++AEQTNLLALNAAIEAARAGE GRGFAVVADEVR LAQRTQQST EI  ++  L
Sbjct: 474 MDVIKAVAEQTNLLALNAAIEAARAGEAGRGFAVVADEVRGLAQRTQQSTVEIETLVAAL 533

Query: 438 QKNSGAAVNVIMESNRASQLTVEQASQAGESLGEIAQALRNLSGLNASIASATLQQSHVV 497
           Q  +    ++++ S   +  +V  + QAG SLG I Q + ++  +N  IA+A  +QS V 
Sbjct: 534 QSGTRQVSSIMLNSRELTVSSVTLSRQAGTSLGSITQTVSSIQAMNQQIAAAAEEQSAVA 593

Query: 498 EDINQNVTQAAGLAQESTLAAEQSSEAGKQLGELAGQLNRLLSQFRV 544
           E+I++++     +++++  A+E+++ +  +L  L GQL  ++S+FR+
Sbjct: 594 EEISRSIVNVRDVSEQTASASEETAASSVELARLGGQLQTMVSRFRI 640