Pairwise Alignments

Query, 318 a.a., diguanylate cyclase (GGDEF) domain from Pseudomonas stutzeri RCH2

Subject, 579 a.a., GGDEF domain-containing protein from Vibrio cholerae E7946 ATCC 55056

 Score =  141 bits (356), Expect = 3e-38
 Identities = 79/206 (38%), Positives = 123/206 (59%), Gaps = 8/206 (3%)

Query: 116 PLKGINGSIDQVCLIIYDVTDVAVNRRQLQAANAELQRLSSTDRLTGLYNRGHWEEMLRL 175
           P  G NG    V ++  DV++  +   QL+AAN EL+RLS  D LT + NR  ++E L  
Sbjct: 375 PASGTNG----VLIMARDVSERYLAAEQLEAANQELERLSFLDSLTHVANRRRFDEQLHT 430

Query: 176 DYARHRRYDSQAALVMFDIDHFKAINDSYGHQVGDSVIQQVADLIRENL-RDSDVAGRYG 234
            +  H R     ++++ D+D+FK  ND+YGH +GD  ++Q+A    +   R SD   RYG
Sbjct: 431 LWHLHVREGKPLSIILCDVDYFKDYNDAYGHLMGDETLKQIAIAFTQVANRHSDCVARYG 490

Query: 235 GEEFVVLLPDTDKQGALIFAERLRQAVEAREVRHEQYRI--RFTISLGVADL-SMPTTSH 291
           GEEF +LLP+T + GA++ AER+ + V    + H+  ++  R T+SLG+  L   P    
Sbjct: 491 GEEFGILLPNTPQSGAILVAERIHEKVRGLAIPHDHSKVADRITVSLGIVTLIPRPEDVP 550

Query: 292 AQLIEWADSALYVSKACGRNRVTLHE 317
            Q++E AD ALY +KA GRN+ ++++
Sbjct: 551 EQMVELADRALYQAKANGRNQTSIYQ 576