Pairwise Alignments

Query, 318 a.a., diguanylate cyclase (GGDEF) domain from Pseudomonas stutzeri RCH2

Subject, 485 a.a., GGDEF domain protein (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  132 bits (332), Expect = 2e-35
 Identities = 69/168 (41%), Positives = 105/168 (62%), Gaps = 1/168 (0%)

Query: 150 ELQRLSSTDRLTGLYNRGHWEEMLRLDYARHRRYDSQAALVMFDIDHFKAINDSYGHQVG 209
           +L+ ++STD+LTG  NR  +EE       + +   +  ++++ DIDHFK +NDSYGH VG
Sbjct: 319 KLEIMASTDKLTGAANRQVFEEYFHQALDKAKLSQTSISILLIDIDHFKKVNDSYGHSVG 378

Query: 210 DSVIQQVADLIRENLRDSDVAGRYGGEEFVVLLPDTDKQGALIFAERLRQAVEAREVRHE 269
           D V++ V +L+R  L+  D+  R+GGEEF+VLLP+ D   A   AER R ++  RE++  
Sbjct: 379 DLVLKTVTNLLRSQLKPQDILCRWGGEEFLVLLPEMDLSRAAELAERFRDSISQRELKVN 438

Query: 270 QYRIRFTISLGVADLSMPTTSHAQLIEWADSALYVSKACGRNRVTLHE 317
              I  T+S+GVA+      +   LI+ AD ALY +K  GRN+V L++
Sbjct: 439 GVHIAITVSIGVAEYQKLEPAE-DLIKRADLALYQAKEAGRNQVVLNQ 485