Pairwise Alignments

Query, 327 a.a., Response regulator containing CheY-like receiver domain and AraC-type DNA-binding domain from Pseudomonas stutzeri RCH2

Subject, 190 a.a., conserved hypothetical protein (NCBI ptt file) from Shewanella oneidensis MR-1

 Score = 70.9 bits (172), Expect = 2e-17
 Identities = 55/195 (28%), Positives = 92/195 (47%), Gaps = 21/195 (10%)

Query: 140 RDTFREVVNIAMGRAAALLARVLGVFIQLPIPNVNILEVGELHMALADAARGEKLTAVCQ 199
           RD  +E++NI+MG+AA  LAR++   I L IP ++ +   +    L+D    + +    Q
Sbjct: 10  RDALQELMNISMGQAANSLARLIEAKITLSIPKISDVTPEQFVSMLSD----QTMWYTRQ 65

Query: 200 GYIGGGIAGEALLLFHDSEVADMARLMRRQDYLEM----EMLLDLSSLLISACLSGIAEQ 255
            ++ G I GE +          + +LM  Q  L      E+LL+L+++L  ACL+G AEQ
Sbjct: 66  SFL-GSIKGEVISTLSKQGCDAIGKLMDYQPPLTQDRLNELLLELANILAGACLTGFAEQ 124

Query: 256 IEVVFSQGHP---QVLGQHASIEELIRINSGRWKKTLAVEISYSLEGHDIHFDLLLLFTE 312
           + +      P       QH            RW  TL +E+ + +E       +++   E
Sbjct: 125 LSLNAKLSMPTMYSATSQHYHY---------RWASTLMMEVEFKVEVSQFDSKIVICLEE 175

Query: 313 DSVELLTRKLAHLMD 327
            SV+ L  KL  L++
Sbjct: 176 ASVQTLLAKLQQLLE 190