Pairwise Alignments

Query, 327 a.a., Response regulator containing CheY-like receiver domain and AraC-type DNA-binding domain from Pseudomonas stutzeri RCH2

Subject, 331 a.a., response regulator (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  304 bits (779), Expect = 2e-87
 Identities = 163/334 (48%), Positives = 221/334 (66%), Gaps = 15/334 (4%)

Query: 4   ISLLICDDSSLARKQLLHALPAGWPVTVSQAATGVEALDRIRQGDIDVLLLDLTMPEMDG 63
           IS+LICDDS++ARKQ+   LP  W V ++ A  G E LD IR G  +V+ LDL MP MDG
Sbjct: 3   ISVLICDDSAMARKQMARTLPKEWDVEITYATNGAEGLDAIRAGKGEVVFLDLNMPVMDG 62

Query: 64  YQVLAQLREEQLECKTIVISADIQEEAVRRVLALGARAFIKKPADPVHLRQTLASLGLLD 123
           Y+VL  +++  L    IV+S DIQ +A  RV ALGA  FI+KP     +   L   G+L 
Sbjct: 63  YEVLQTVQQNDLPALIIVVSGDIQIKAHERVKALGALDFIQKPVSADAISNILQEYGILT 122

Query: 124 DVSALITRVDGE------RISFRDTFREVVNIAMGRAAALLARVLGVFIQLPIPNVNILE 177
                +T+ D        ++  RD  +E+ N+AMGRAA LLA++L VF+ LPIPNVN+LE
Sbjct: 123 -----LTQKDQVEDTPMIKVDMRDACQEIANVAMGRAADLLAKLLDVFVLLPIPNVNVLE 177

Query: 178 VGELHMALADAARGEKLTAVCQGYIGGGIAGEALLLFHDSEVADMARLM----RRQDYLE 233
           V EL MAL        ++A+CQG+IG G+AGEALLLFHDS   DMA+LM          E
Sbjct: 178 VSELTMALKATEESSTVSALCQGFIGAGVAGEALLLFHDSSFQDMAKLMGVANPEDKQTE 237

Query: 234 MEMLLDLSSLLISACLSGIAEQIEVVFSQGHPQVLGQHASIEELIRINSGRWKKTLAVEI 293
           +E+L+D  ++LI A L+GI+EQ+++ FSQ HP VLG+H ++ +LI  NS +W +TLA+EI
Sbjct: 238 IEVLIDTGNVLIGAFLNGISEQLDMKFSQAHPVVLGRHCTVNDLIHDNSEKWHRTLAMEI 297

Query: 294 SYSLEGHDIHFDLLLLFTEDSVELLTRKLAHLMD 327
           +Y +E H+I  DLLLLFTEDS+  L+ KL +L+D
Sbjct: 298 NYRIENHNIQCDLLLLFTEDSIPTLSYKLGYLLD 331