Pairwise Alignments

Query, 1230 a.a., 5-methyltetrahydrofolate--homocysteine methyltransferase from Pseudomonas stutzeri RCH2

Subject, 1240 a.a., B12-dependent methionine synthase (RefSeq) from Shewanella loihica PV-4

 Score = 1568 bits (4060), Expect = 0.0
 Identities = 791/1228 (64%), Positives = 963/1228 (78%), Gaps = 12/1228 (0%)

Query: 10   ALQQALKERILILDGGMGTMIQSYKLEEEDYRGTRFADWPQDVKGNNDLLLLSRPDIIQA 69
            A++  L + ILILDG MGTMIQ++KLEE D+RG RF  WP D+KGNNDLL+L++P++I+ 
Sbjct: 16   AIRARLNKEILILDGAMGTMIQNHKLEEADFRGERFKQWPCDLKGNNDLLVLTQPELIKQ 75

Query: 70   IEKAYLDAGADILETNTFNATRVSQADYGMEELVYELNVEGARLAREVADAKTAETPDRP 129
            I + YL AGADI+ETNTFNAT+V+ ADY M+EL  E+N+EGARLAR   D   AE+  R 
Sbjct: 76   IHRDYLLAGADIIETNTFNATQVAMADYEMQELSREINLEGARLARTACDEVAAES-GRQ 134

Query: 130  RFVAGVLGPTSRTCSISPDVNNPGYRNVTFDLLVENYVEATRGLIEGGADLILIETIFDT 189
             +VAGVLGPT+RTCSISPDVN+PGYRN+ FD LVE Y+E+T+ LIEGGAD+I++ETIFDT
Sbjct: 135  CYVAGVLGPTNRTCSISPDVNDPGYRNIHFDDLVEAYIESTQALIEGGADIIMVETIFDT 194

Query: 190  LNAKAAIFAVQQVFEDEGVELPIMISGTITDASGRTLSGQTTEAFWNSVRHAKPISVGLN 249
            LNAKAA+FA++ +F+  G  LP+MISGTITDASGRTL+GQTTEAF+NS+RH KP+S+GLN
Sbjct: 195  LNAKAALFAIETLFDQLGQRLPVMISGTITDASGRTLTGQTTEAFYNSLRHVKPLSIGLN 254

Query: 250  CALGAKDLRPYLEELSSKAETFVSAHPNAGLPNAFGEYDESPAEMAAVVEEFAASGFLNI 309
            CALG ++LRPY+EELS  AE +VSAHPNAGLPN FG YDE+P +MA V+  +A  G LNI
Sbjct: 255  CALGPQELRPYVEELSKIAECYVSAHPNAGLPNEFGGYDETPEQMAEVIGPWAEEGLLNI 314

Query: 310  IGGCCGTTPAHIQAIAEAVSKYPPRAIPDIPKACRLSGLEPFTIDRSSLFVNVGERTNIT 369
            IGGCCGTTP HI+AI  AV K+  R +PD+P ACRLSGLEP TID  SLFVNVGERTN+T
Sbjct: 315  IGGCCGTTPDHIKAIRAAVIKHGARELPDLPVACRLSGLEPLTIDADSLFVNVGERTNVT 374

Query: 370  GSAKFARLIREENYTEALEVALQQVEAGAQVIDINMDEGMLDSKAAMVTFLNLIAGEPDI 429
            GSAKF RLI+   Y EAL VA  QVE GAQ+IDINMDEGMLD    M  FLNLIA EPDI
Sbjct: 375  GSAKFLRLIKTGEYEEALSVARDQVENGAQIIDINMDEGMLDGVEVMQKFLNLIASEPDI 434

Query: 430  SRVPIMIDSSKWEVIEAGLKCIQGKGIVNSISMKEGVEQFKQQAHLCKRYGAAVVVMAFD 489
            SRVPIMIDSSKWEVIEAGLKCIQGKG+VNSIS+KEG  +F +QA L KRYGAA ++MAFD
Sbjct: 435  SRVPIMIDSSKWEVIEAGLKCIQGKGVVNSISLKEGEAKFIEQATLVKRYGAAAIIMAFD 494

Query: 490  EAGQADTAARKREICKRSYDILVNEVGFPPEDIIFDPNIFAIATGIEEHNNYAVDFIEAC 549
            E GQADT ARK EIC R+Y +LV++VGFPPEDIIFDPNIFAIATGI+EH+NYAVDFIEA 
Sbjct: 495  EVGQADTMARKIEICTRAYRVLVDKVGFPPEDIIFDPNIFAIATGIDEHDNYAVDFIEAT 554

Query: 550  AYIRDNLPYALTSGGVSNVSFSFRGNNPVREAIHSVFLFHAIKAGLTMGIVNAGQLEIYD 609
              I+  LP+A+ SGGVSNVSFSFRGNNPVREAIH+VFL+HAI+AG+ MGIVNAGQL IYD
Sbjct: 555  REIKRTLPHAMISGGVSNVSFSFRGNNPVREAIHAVFLYHAIQAGMDMGIVNAGQLAIYD 614

Query: 610  EIPKELRDAVEDVVLN-----RSANGTEGLLELADKYKGDGSV-KEAETEEWRSLPVDKR 663
            +I  +L+  VE VV N     + +N TE LLE+A++Y+GDG+   + E  EWRS PV+KR
Sbjct: 615  DIDPDLKARVEAVVQNLPCPVQGSNNTEQLLEIAEQYRGDGAAGAKKEDLEWRSWPVNKR 674

Query: 664  LEHALVKGITAFIVEDTEECRQQCKRPIEVIEGPLMSGMNVVGDLFGAGKMFLPQVVKSA 723
            LEHALVKGIT FI +DTEE RQ   RP++VIEGPLM GMNVVGDLFG+GKMFLPQVVKSA
Sbjct: 675  LEHALVKGITEFIDQDTEEARQLASRPLDVIEGPLMDGMNVVGDLFGSGKMFLPQVVKSA 734

Query: 724  RVMKQAVAHLIPFIEAEKGDKPEAKGKILMATVKGDVHDIGKNIVGVVLGCNGYDVVDMG 783
            RVMK+AVA+L P+IEAEK +  E+ GKILM TVKGDVHDIGKNIVGVVL CNGY+VVD+G
Sbjct: 735  RVMKKAVAYLNPYIEAEKVE-GESNGKILMVTVKGDVHDIGKNIVGVVLACNGYEVVDLG 793

Query: 784  VMVPAEKILQTAIAEKCDIIGLSGLITPSLDEMVHVAKEMQRQGFSLPLMIGGATTSKAH 843
            VMVP EKI++ A AEK DIIG+SGLITPSLDEMVH  K   + G ++P +IGGAT SK H
Sbjct: 794  VMVPVEKIIEVAKAEKVDIIGMSGLITPSLDEMVHNVKAFHKAGLNIPSIIGGATCSKIH 853

Query: 844  TAVKIDPQYHNDAVVYVTDASRAVGVATTLLSKELKPAFVEKTREEYAMIRERTANRSAR 903
            TAVKI P +  +  +Y+ DASRAV +   L++KE + A ++   EEY ++R++  +++ R
Sbjct: 854  TAVKIAP-HAPEGAIYIADASRAVPMVAKLINKETRQATIDAAYEEYRVMRDKRNSQAKR 912

Query: 904  TERLSYAQAVANKPQFDWASYTPVKPSFTGRQLLEDIDLRTLAEYIDWTPFFIAWDLAGK 963
             + +S   A  N+ Q DW ++TP  P+  GRQ+ +D  L  L + IDWTPFF +W+L G 
Sbjct: 913  KQIVSLEAARENRCQQDWNAHTPFVPNQLGRQVFDDYPLEDLVDRIDWTPFFRSWELHGH 972

Query: 964  YPRILEDEVVGEAATALFSDAQAMLNKLIDEKLIRARAVFGFWPANQVQDDDLEVYGDGG 1023
            +P+IL+DEVVGE A  L+ DA+AML  +IDEK + A+AV G +PAN V  DD+E+Y D  
Sbjct: 973  FPKILDDEVVGEEARKLYQDAKAMLKTIIDEKWLTAKAVIGLFPANTVNYDDIEIYTDES 1032

Query: 1024 EKLA--TLHHLRQQIIKPDAKPNLSLADFVAPKDSGITDYVGGFICTAGIGAEELAKAYQ 1081
                  T HHLR QI +     N  LADFVAPKDSG+ DY+GGF  TAG G +E    ++
Sbjct: 1033 RSKVEMTTHHLRMQIERV-GNDNFCLADFVAPKDSGVADYMGGFAVTAGHGIDEHVARFE 1091

Query: 1082 DKGDDYNSIMVKALADRLAEACAEWLHQQVRKQYWGYAKDEQLSNEELIREQYKGIRPAP 1141
               DDY++IM+K LADRL EA AE +H++VRK++WGYA DE L NE LIRE+YKGIRPAP
Sbjct: 1092 ANHDDYSAIMLKCLADRLVEAFAERMHERVRKEFWGYAADENLDNEALIREKYKGIRPAP 1151

Query: 1142 GYPACPDHTEKGTLFQLLDADGISQVTLTEHYAMLPTAAVSGWYFAHPEAQYFAVGKIDK 1201
            GYPACPDHTEKG L++LL  D    + +TE YAM PTAAVSGWYFAHP+++YF V  I +
Sbjct: 1152 GYPACPDHTEKGLLWELLKPDETIDLKITESYAMFPTAAVSGWYFAHPQSRYFGVTNIGR 1211

Query: 1202 DQVESYSQRKGEDIAVSERWLMPNLGYD 1229
            DQVE Y++RKG  +  +ERWL P L YD
Sbjct: 1212 DQVEDYAKRKGMSVEETERWLAPVLDYD 1239