Pairwise Alignments

Query, 340 a.a., Periplasmic serine proteases (ClpP class) from Pseudomonas stutzeri RCH2

Subject, 353 a.a., protease SohB from Vibrio cholerae E7946 ATCC 55056

 Score =  327 bits (839), Expect = 2e-94
 Identities = 183/349 (52%), Positives = 236/349 (67%), Gaps = 19/349 (5%)

Query: 1   MEFLVDYASFLAKTVTLVVAIVIVLIALASMRRGRSKQGGGHLEVHKLNEFYKSMRERLE 60
           MEFL+DY  FLAK VT+VVA+V VL+ + S+  GRS    G LE+  L E +K   ERLE
Sbjct: 1   MEFLLDYGLFLAKIVTVVVALVAVLVIVKSLG-GRSGGAKGELEITDLTEQHKETVERLE 59

Query: 61  QAVLEKDAF------------KALRKREAKAAKQNKKP-----ETPARVFVLDFDGDIRA 103
            A L  +AF            KA +K   K+ KQ  K      +    +FVLDF G I A
Sbjct: 60  -AYLHDEAFLKARDKADKKKEKAEQKSREKSLKQAAKEGELESKRDPHLFVLDFHGSIDA 118

Query: 104 SAVDNLRHEITALLTMATPQDEVVLRLESGGGMVHGYGLAASQLVRIRDAGVPLTVCVDK 163
             V +LR E++A+L +A   DEV+LRLE+GGGMVHGYGLA+SQL R++ AG+PLT+ VDK
Sbjct: 119 KEVASLREEVSAILAVAQAGDEVLLRLETGGGMVHGYGLASSQLDRLKAAGLPLTIAVDK 178

Query: 164 VAASGGYMMACIGNRILTAPFAILGSIGVVAQLPNVHRLLKKHDVDFEVLTAGEYKRTLT 223
           VAASGGYMMACI ++I++APFAI+GSIGVVAQLPN H+LLKK+D++FE LTAGEYKRTLT
Sbjct: 179 VAASGGYMMACIADKIVSAPFAIVGSIGVVAQLPNFHKLLKKNDIEFEQLTAGEYKRTLT 238

Query: 224 VFGENTEKGREKFQEDLETTHELFKNFVARYRQNLSIDDVATGEVWLGIAALGKHLADEL 283
           +FGENT+K REKF+++LE TH+LFK+F+  +R  L +D VATGE W G  A    L DE+
Sbjct: 239 MFGENTDKAREKFKQELEETHQLFKDFIREHRPALDLDKVATGEHWFGTQAKALGLVDEI 298

Query: 284 KTSDQYLAERAQEAELFQLHYIQKKSLPERFGMAASTVMEHGLLKGWSR 332
           +TSD  +    +   +  L Y QKK L ++    A    ++ LLK  SR
Sbjct: 299 QTSDDLIVAACKSKTVLLLRYTQKKKLADKLAGVAGDAADNVLLKLISR 347