Pairwise Alignments

Query, 340 a.a., Periplasmic serine proteases (ClpP class) from Pseudomonas stutzeri RCH2

Subject, 439 a.a., minor capsid protein C, degenerate (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score = 45.1 bits (105), Expect = 3e-09
 Identities = 39/148 (26%), Positives = 65/148 (43%), Gaps = 2/148 (1%)

Query: 106 VDNLRHEITALLTMATPQDEVVLRLESGGGMVHGYGLAASQLVRIRDAGV-PLTVCVDKV 164
           +D +R  I A L     +  ++L + S GG V G    A  +   R  G  P+    + +
Sbjct: 98  LDQIRPAIAAALADRGVR-AILLDVASPGGTVAGMKELADYIGAERAKGTKPMAAYANGL 156

Query: 165 AASGGYMMACIGNRILTAPFAILGSIGVVAQLPNVHRLLKKHDVDFEVLTAGEYKRTLTV 224
            AS  YM+     R+L    A +GSIGV++   +  +  +K  + +  LTAG++K     
Sbjct: 157 MASAAYMIGSATGRVLAPATATVGSIGVISVYEDWSKWNEKAGLSYAYLTAGQWKAVGNP 216

Query: 225 FGENTEKGREKFQEDLETTHELFKNFVA 252
                +  R   QE L   +  F + V+
Sbjct: 217 DTPLADNERAYLQERLTALYRHFTDGVS 244