Pairwise Alignments

Query, 261 a.a., Predicted permeases from Pseudomonas stutzeri RCH2

Subject, 259 a.a., hypothetical protein from Vibrio cholerae E7946 ATCC 55056

 Score =  272 bits (695), Expect = 6e-78
 Identities = 131/253 (51%), Positives = 179/253 (70%), Gaps = 5/253 (1%)

Query: 9   LDPSTLVILFAVAFTAGFIDAIAGGGGLLTIPALLTAGLPPHLVLGTNKLCATFGSATAS 68
           ++P+T+++L  VAF AGFIDA+AGGGG+LT+PALL+ GLPPHL LGTNKL ATF S+TA+
Sbjct: 5   IEPTTIMVLALVAFIAGFIDAVAGGGGMLTVPALLSLGLPPHLALGTNKLAATFASSTAA 64

Query: 69  YTFYRRRLFEPEMWRRALVGTAIGAALGAALAQFMPASWLNQLLPLVVSACGIYLLFSHM 128
           +T+YR++LF+P  W+RA + T IGA LG      +   WL ++LPL++ A  +Y +  H 
Sbjct: 65  WTYYRQKLFDPACWKRAFIATLIGAILGTLAVDAISTDWLRKVLPLIILAAALYTVL-HR 123

Query: 129 PAKPSSDALVIG----RKRQWPQSLSLGFYDGVAGPGTGAFWTVSSMLLYPLDLLRASGV 184
           P +              ++Q  Q + LGFYDG+AGPGTGAFWTVSSM LY  ++L ASG+
Sbjct: 124 PHQTEQSVTPEPCPKLHRKQILQGIGLGFYDGLAGPGTGAFWTVSSMALYRFNILLASGL 183

Query: 185 ARTMNFVSNAVALSVFVIGGHVAWVLGIGMGLALMAGAYFGARTAIRGGSQFIRPIFILV 244
           A+ MN  SN  +L  F + GH+ W+LG+ MG+ LMAGAY GA +AIR G+ FIRP+FILV
Sbjct: 184 AKAMNLTSNFTSLVTFALLGHIDWLLGLTMGVCLMAGAYVGAHSAIRFGAPFIRPLFILV 243

Query: 245 VLAMSLRLAWQHW 257
           V  ++ +LA+  W
Sbjct: 244 VTILAGKLAYDAW 256