Pairwise Alignments

Query, 609 a.a., ABC-type oligopeptide transport system, periplasmic component from Pseudomonas stutzeri RCH2

Subject, 500 a.a., extracellular solute-binding protein, family 5 from Pseudomonas syringae pv. syringae B728a

 Score = 60.5 bits (145), Expect = 2e-13
 Identities = 93/433 (21%), Positives = 161/433 (37%), Gaps = 71/433 (16%)

Query: 115 IAESVEYSDNNSWVVFNLRKQARFHDGKPITAYDVAFSYRLLVKDGHPQYRTNLQGVKRV 174
           +A +  +S++   +   LR+   +HDG+P  A  V F+            ++ L  V  V
Sbjct: 70  LATAWNWSEDGKTLTMTLREGVTYHDGEPFDAASVKFNLDRARTLPDSLRKSELASVDSV 129

Query: 175 DILNRHRIRFVFEQPDNPLLVMRLGELPVLPQHYWKNRDFKATTFEPPLGSGPYRITHVQ 234
           ++++   +    +Q D  L+        ++        +F +     P+ SGPY+     
Sbjct: 130 EVIDAKTVAIKLKQADATLVSQLSDRAGMMLAPKAAQGEFASN----PVCSGPYKFVQRV 185

Query: 235 PGRQVVFERVRNWWGAKLPVNQGKYNFNRVDVEFYRDSVVAFEAFKVAEFDFYIEHQAKN 294
              ++V ER  N+W      N+  Y+F++V      D+ V     +  + D  IE  A  
Sbjct: 186 QQDRIVLERFDNYW------NKQAYHFDKVVFLPIPDTSVRLANLRSGDLDI-IERVAPT 238

Query: 295 WANGYEFPAMLRGDIIRA--EIPHQIPTQTQALFMNSRRATF---ADQRVREALGLMFDF 349
                     ++GD   A    P     Q      N  +A      D+RVR+A  L  D 
Sbjct: 239 DVK------TVKGDSKLAIYNTPGLGYMQLMFNIGNGEKANSPMGKDKRVRKAFELSIDR 292

Query: 350 EWTNRALFYGAYRRSESYYP-NSDFTATGKPEGGEWLLLSPYRKQLPAKLFTEPFELPRT 408
           +  N+ +F G Y  S   +P NS +                Y K+LP             
Sbjct: 293 DAINQVVFEGLYAPSAQPFPKNSPY----------------YDKELP------------- 323

Query: 409 DGRGIPRETLRRALGLLAEAGWKASDAGLLNGAGQPLRFEILLVNPRLERVLQPYVENLA 468
               IP   + ++  LLA+AG K   A  L  A  P+  ++        +++Q   E   
Sbjct: 324 ----IPTRDIEKSKALLAQAGVKLPLAVDLKVANNPIAQQV-------GQIIQAMAE--- 369

Query: 469 RIGIQANLRTVDSAQYKQRLDHYDYDMILMTLVQSLSPGIEQHLYFHSSQVDVKGGRNYA 528
             G + NL   + A         ++ + +        P  + H +     V  KGG+N  
Sbjct: 370 EAGFKVNLIATEYATMLSEQASGNFQIGMSAWSGRPDPDGDIHQF-----VTCKGGQNDG 424

Query: 529 GVANPIIDDLIAK 541
              N  +D+L+ K
Sbjct: 425 KYCNARLDELLNK 437