Pairwise Alignments

Query, 609 a.a., ABC-type oligopeptide transport system, periplasmic component from Pseudomonas stutzeri RCH2

Subject, 640 a.a., ABC transporter extracellular solute-binding protein from Phaeobacter inhibens DSM 17395

 Score =  398 bits (1023), Expect = e-115
 Identities = 227/614 (36%), Positives = 345/614 (56%), Gaps = 29/614 (4%)

Query: 3   ALLLLLTCLALSFPALATISESHGYAQFGTLKYPASFTHFDWVNPRAPKGGRIKLMASGT 62
           AL++    ++L+F A   + +SHG+ +FG LKYP  F HFD+VNP APKGG + L A GT
Sbjct: 31  ALIICALTVSLAF-AEERVIKSHGFTEFGELKYPEGFAHFDYVNPEAPKGGELSLSAVGT 89

Query: 63  FDTLNPYTFKGTSPSATPGFLQYGISELNEPLMVGTGIYDPSGDEPASSYGLIAESVEYS 122
           FD++NPYT KG   + +            E LM+G      S DEP S YGL+AES+EY 
Sbjct: 90  FDSMNPYTRKGRGGAMSADHF--------ESLMIG------SYDEPGSYYGLLAESLEYP 135

Query: 123 DNNSWVVFNLRKQARFHDGKPITAYDVAFSYRLLVKDGHPQYRTNLQG-VKRVDILNRHR 181
           ++  WV+FN+R +ARF DG P+TA DV FS+ LL++ G   Y   ++  + + ++L  HR
Sbjct: 136 ESQDWVIFNMRPEARFSDGTPVTAEDVVFSHNLLLEQGLKSYAEAVKKRIPKAEVLGPHR 195

Query: 182 IRFVFEQPDNP--LLVMRLGELPVLPQHYWK----NRDFKATTFEPPLGSGPYRITHVQP 235
           ++F F  PD P   ++ ++    V  + +++    NR       +P +GSGPY +     
Sbjct: 196 VKFYFS-PDFPRRAMITQVAGTSVFSKSWFEADPENRRLDEPRLDPGIGSGPYVLESADV 254

Query: 236 GRQVVFERVRNWWGAKLPVNQGKYNFNRVDVEFYRDSVVAFEAFKVAEFDFYIEHQAKNW 295
            +++V++R  ++WG  + VN G++N++R+ +E++ DSV A E FK   +    E+ +K+W
Sbjct: 255 NQRIVYKRNPDYWGNDVNVNVGRHNYDRIRIEYFGDSVAAMEGFKAGVYTMRPENSSKSW 314

Query: 296 ANGYEFPAMLRGDIIRAEIPHQIPTQTQALFMNSRRATFADQRVREALGLMFDFEWTNRA 355
           A  Y F A+  GD+++ E P           MN  R  F D RVREA+ L ++FEWTN +
Sbjct: 315 ATAYGFDAVKEGDVVKGEFPDGNVPAASGFVMNLLRPKFQDPRVREAIQLAYNFEWTNDS 374

Query: 356 LFYGAYRRSESYYPNSDFTATGKPEGGEWLLLSPYRKQL-PAKLFTEPFELPRT-DGRGI 413
           L YG + +  S++ +S   A G PEG E  +L     Q+ PA L +EP     +   R  
Sbjct: 375 LQYGLFAQRHSFWQDSALEAKGLPEGRELEVLQDLGDQIDPALLTSEPVMAHSSKPARPA 434

Query: 414 PRETLRRALGLLAEAGWKASDAGL-LNGAGQPLRFEILLVNPRLERVLQPYVENLARIGI 472
            R  LRRA+ LL EA W   D GL  N  G+ L+ E L+ +P +ER++QPY+ NL ++G+
Sbjct: 435 DRRNLRRAMKLLDEADWAVGDDGLRRNAKGEVLKLEFLIDSPTIERIVQPYIANLRQMGV 494

Query: 473 QANLRTVDSAQYKQRLDHYDYDMILMTLVQSLSPGIEQHLYFHSSQVDVKGGRNYAGVAN 532
            A    VD AQY  R    D+DMI     + L P    +  F S   +     N AG+A+
Sbjct: 495 DAISNRVDFAQYTSRRREKDFDMITYAYPKYLQPSTGLYQQFGSDAHEF-SVFNPAGMAD 553

Query: 533 PIIDDLIAKLLAAQTRDEQVAAARAIDRVLLWNHYTIPNWFISNHRLAYRNRFAH-VTTP 591
           P +D LI  ++ A+ ++E  A  RA+DRVL    + +P W++  + +AY N +    T P
Sbjct: 554 PAVDTLIGAIVKAEDQEELYANVRALDRVLRAKRFMVPTWYLDVNWVAYWNFYEQPETLP 613

Query: 592 PYTLGLR-AWWLKS 604
            + LGL   WW+ +
Sbjct: 614 LFDLGLSDVWWVNA 627