Pairwise Alignments

Query, 628 a.a., ABC-type oligopeptide transport system, periplasmic component from Pseudomonas stutzeri RCH2

Subject, 543 a.a., ABC transporter substrate-binding protein from Sinorhizobium meliloti 1021

 Score = 87.8 bits (216), Expect = 1e-21
 Identities = 107/453 (23%), Positives = 172/453 (37%), Gaps = 51/453 (11%)

Query: 96  SLDEPFTVYGLLAEKIEKGPNNSWVRFHLRPQARFHDGEPVKAEDVVFTFETLMSKGAPH 155
           S D+ F    LLA +     +     F LR   R+HDG    AE V F+   L  +  P 
Sbjct: 82  SYDKDFNPQPLLATEWTVSEDGLRYWFKLRQDVRWHDGRDFTAEAVAFSILAL-KENHPR 140

Query: 156 YRGYYADVEKVVAESPRRVRFDFKHAGNRELPMILG-QLPVLPKHWWEDRDFSSGSLEV- 213
            R  +A V++    +   V           L      + P++PKH +E    +     V 
Sbjct: 141 GRATFAHVKEANVLNSHEVELTLAKPAPYLLTAFASFEAPIVPKHLYEGTKIAENPHNVA 200

Query: 214 PLGSGPYRVDKIQAGRSIRYARVEDYWGKDLPVNRGFYNFDRINFDYYRDNTVALQAFKA 273
           P+G+GPY+  +   G    + R EDYWG   P        D+I F +  D   A+ A + 
Sbjct: 201 PVGTGPYKFVEWVRGSHALFVRNEDYWGSPKPY------LDQIIFRFIVDPAAAVAAIET 254

Query: 274 GHFDYWFETSAKNWATAYDIAAVRDGRIVKDEIRNYNPTGMQGFIFNIRRPQLEDRRVRE 333
           G       ++A    T  D        +V  +   Y+P+ +    FN+    L D +VR 
Sbjct: 255 GEVQV---STANLPLTDIDRLKANPNLVVDTDPAPYSPS-IARAEFNLENKYLADIKVRH 310

Query: 334 ALGLLFDYEWTNRQLFNGAYTRTRSYFDNSELASSGLPDADELKVLEPLRGKIPDEVFDK 393
           A+    D ++    ++ G  TR             G    D  K   P    +P   FD 
Sbjct: 311 AIAHAVDKDFIVNTVYLGYATRL-----------DGPVSPDLAKFYSP---DLPKYEFDP 356

Query: 394 AFELPHTEGNGVIREQQRQAYRLLTEAGWKVENDRMLDAQDKPVKLEFLLVQAEFERVLL 453
           A                 ++ +LL EAG+     R  D     + ++        ++   
Sbjct: 357 A-----------------KSEKLLDEAGYA----RGADGFRFKLFIDPTQPSGPPKQTAE 395

Query: 454 PYKRNLADLGIELEIRRVDVSQYINRL-RSRDYDMIVSGFGQSNSPG-NEQREYWHSASA 511
              + LA +GI++E+R  D + ++ R+   RD+D+ + G      P    QR YW     
Sbjct: 396 YIAQALAKVGIKVELRTQDFATFVKRVFTDRDFDIAIEGMSNLYDPTVGVQRLYWSKNFK 455

Query: 512 DNPGSRNFIGLKDPAIDSLVE-GLIGADSRKEL 543
                 N     +P +D L+E   +  D +K L
Sbjct: 456 PGVPFTNGSKYSNPEVDRLLETAAVEIDPKKRL 488